Microbial communities in boreal peatlands
Ontology highlight
ABSTRACT:
PROVIDER: PRJEB25886 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| ERR2497910_1.fastq.gz | Fastqsanger.gz | |||
| ERR2497910_2.fastq.gz | Fastqsanger.gz |
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Project description:Tardigrades (Tardigrada) are a phylum of micrometazoans found in all biomes on Earth, but their ecology and habitat preferences remain vastly understudied. Boreal peatlands include a diversity of habitat types and high structural heterogeneity that represents an interesting system to study some of the poorly known habitat preferences of tardigrades. Here, we investigate for the first time tardigrade communities in peatland mosses and the latter's potential associations with key environmental variables. We collected 116 moss samples from 13 sites representing different peatland types and management histories. We found that tardigrades are common and diverse in boreal peatlands, as tardigrades were present in 72% of the collected samples and we identified 14 tardigrade genera. Tardigrade abundance seemed to increase alongside the increasing tree basal area and the density was higher in the microtopographic level further from the water table level, that is, hummocks (mean 117/moss gram) than in lawns/hollows (mean 84/moss gram). Furthermore, the highest tardigrade density was found in the moss taxa that are associated with forested peatland types (i.e., feather mosses) (321 mean/moss gram). Finally, we found interesting patterns regarding tardigrade functional diversity, as carnivorous tardigrades were found only in peatlands with tree basal area > 20 m2 and mostly in hummocks. Our study demonstrates that the habitat heterogeneity of peatlands (e.g., variation in moisture and vegetation cover) represents an interesting system to study tardigrade ecology and habitat preferences. However, since we found variation in tardigrade abundance and communities across peatland types and microhabitats within peatlands, our results highlight that such studies should be conducted with numerous replicate samples and a systematic study design that properly addresses the habitat heterogeneity between and within different peatland types.
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Project description:Permafrost vulnerability to climate change may be underestimated unless effects of wildfire are considered. Here we assess impacts of wildfire on soil thermal regime and rate of thermokarst bog expansion resulting from complete permafrost thaw in western Canadian permafrost peatlands. Effects of wildfire on permafrost peatlands last for 30 years and include a warmer and deeper active layer, and spatial expansion of continuously thawed soil layers (taliks). These impacts on the soil thermal regime are associated with a tripled rate of thermokarst bog expansion along permafrost edges. Our results suggest that wildfire is directly responsible for 2200 ± 1500 km2 (95% CI) of thermokarst bog development in the study region over the last 30 years, representing ~25% of all thermokarst bog expansion during this period. With increasing fire frequency under a warming climate, this study emphasizes the need to consider wildfires when projecting future circumpolar permafrost thaw.
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Project description:Peatlands are significant carbon (C) stores, playing a key role in nature-based climate change mitigation. While the effectiveness of non-forested peatlands as C reservoirs is increasingly recognized, the C sequestration function of forested peatlands remains poorly documented, despite their widespread distribution. Here, we evaluate the C sequestration potential of pristine boreal forested peatlands over both recent and millennial timescales. C stock estimates reveal that most of the carbon stored in these ecosystems is found in organic horizons (22.6-66.0 kg m-2), whereas tree C mass (2.8-5.7 kg m-2) decreases with thickening peat. For the first time, we compare the boreal C storage capacities of peat layers and tree biomass on the same timescale, showing that organic horizons (11.0-12.6 kg m-2) can store more carbon than tree aboveground and belowground biomass (2.8-5.7 kg m-2) even over a short time period (last 200 years). We also show that forested peatlands have similar recent rates of C accumulation to boreal non-forested peatlands but lower long-term rates, suggesting higher decay and more important peat layer combustion during fire events. Our findings highlight the significance of forested peatlands for C sequestration and suggest that greater consideration should be given to peat C stores in national greenhouse gas inventories and conservation policies.
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Project description:Boreal peatlands store ~25 % of global soil organic carbon and host many endangered species; however, they face degradation due to climate change and anthropogenic drainage. In boreal peatlands, vegetation indicates ecohydrological conditions of the ecosystem. Applying remote sensing would enable spatially and temporally continuous monitoring of peatland vegetation. New multi- and hyperspectral satellite data offer promising approaches for understanding the spectral properties of peatland vegetation at high temporal and spectral resolutions. However, using spectral satellite data to their fullest potential requires detailed spectral analyses of dominant species in peatlands. A dominant feature of peatland vegetation is the genus Sphagnum mosses. We investigated how the reflectance spectra of common boreal Sphagnum mosses, collected from waterlogged natural conditions after snowmelt, change when the mosses are desiccated. We conducted a laboratory experiment where the reflectance spectra (350-2500 nm) and the mass of 90 moss samples (representing nine species) were measured repetitively. Furthermore, we examined (i) their inter- and intraspecific spectral differences and (ii) whether the species or their respective habitats could be identified based on their spectral signatures in varying states of drying. Our findings show that the most informative spectral regions to retrieve information about the Sphagnum species and their state of desiccation are in the shortwave infrared region. Furthermore, the visible and near-infrared spectral regions contain less information on species and moisture content. Our results also indicate that hyperspectral data can, to a limited extent, be used to separate mosses belonging to meso- and ombrotrophic habitats. Overall, this study demonstrates the importance of including data especially from the shortwave infrared region (1100-2500 nm) in remote sensing applications of boreal peatlands. The spectral library of Sphagnum mosses collected in this study is available as open data and can be used to develop new methods for remote monitoring of boreal peatlands.
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Project description:Ecological restoration is expected to reverse the loss of biodiversity and ecosystem services. Due to the low number of well-replicated field studies, the extent to which restoration recovers plant communities, and the factors underlying possible shortcomings, are not well understood even in medium term. We compared the plant community composition of 38 sites comprising pristine, forestry-drained, and 5 or 10 years ago restored peatlands in southern Finland, with special interest in understanding spatial variation within studied sites, as well as the development of the numbers and the abundances of target species. Our results indicated a recovery of community composition 5-10 years after restoration, but there was significant heterogeneity in recovery. Plant communities farthest away from ditches were very similar to their pristine reference already 10 years after restoration. In contrast, communities in the ditches were as far from the target as the drained communities. The recovery appears to be characterized by a decline in the number and abundance of species typical to degraded conditions, and increase in the abundance of characteristic peatland species. However, we found no increase above the drained state in the number of characteristic peatland species. Our results suggest that there is a risk of drawing premature conclusions on the efficiency of ecological restoration with the current practice of short-term monitoring. Our results also illustrate fine-scale within-site spatial variability in the degradation and recovery of the plant communities that should be considered when evaluating the success of restoration. Overall, we find the heterogeneous outcome of restoration observed here promising. However, low recovery in the number of characteristic species demonstrates the importance of prioritizing restoration sites, and addressing the uncertainty of recovery when setting restoration targets. It appears that it is easier to eradicate unwanted species than regain characteristic species by restoration.
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Project description:The acidic peatlands of southern Brazil are ecosystems essential for the maintenance of the Atlantic Forest, one of the 25 hot-spots of biodiversity in the world. In this work, we investigated the composition of prokaryotic communities in four histosols of three acidic peatland regions by constructing small-subunit (SSU) rRNA gene libraries and sequencing. SSU rRNA gene sequence analysis showed the prevalence of Acidobacteria (38.8%) and Proteobacteria (27.4%) of the Bacteria domain and Miscellaneous (58%) and Terrestrial (24%) groups of Crenarchaeota of the Archaea domain. As observed in other ecosystems, archaeal communities showed lower richness than bacterial communities. We also found a limited number of Euryarchaeota and of known methanotrophic bacteria in the clone libraries.
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Project description:Bacteria play critical roles in peatland ecosystems. However, very little is known of how habitat heterogeneity affects the structure of the bacterial communities in these ecosystems. Here, we used amplicon sequencing of the 16S rRNA and nifH genes to investigate phylogenetic diversity and bacterial community composition in three different sub-Antarctic peat bog aquatic habitats: Sphagnum magellanicum interstitial water, and water from vegetated and non-vegetated pools. Total and putative nitrogen-fixing bacterial communities from Sphagnum interstitial water differed significantly from vegetated and non-vegetated pool communities (which were colonized by the same bacterial populations), probably as a result of differences in water chemistry and biotic interactions. Total bacterial communities from pools contained typically aquatic taxa, and were more dissimilar in composition and less species rich than those from Sphagnum interstitial waters (which were enriched in taxa typically from soils), probably reflecting the reduced connectivity between the former habitats. These results show that bacterial communities in peatland water habitats are highly diverse and structured by multiple concurrent factors.
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2011-07-31 | GSE26071 | GEO