Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sugarcane Genome

ABSTRACT: A mosaic monoploid reference sequence for the highly complex genome of sugarcane

PROVIDER: PRJEB26915 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	UBIK01.dat.gz	Other
	UBIK01.fasta.gz	Fasta.gz
	UBIK01.master.dat	Other
	UBIK01.dat.gz	Other

Items per page:

1 - 4 of 4

Similar Datasets

Sugarcane Genome

Project description:A monoploid reference sequence for the highly complex genome of sugarcane

| PRJEB26450 | ENA

Sugarcane Genome

Project description:A monoploid reference sequence for the highly complex genome of sugarcane

| PRJEB26914 | ENA

Reference sequence for sugarcane genome

Project description:A monoploid reference sequence for the highly complex genome of sugarcane

| PRJEB26913 | ENA

Sugarcane mosaic virus

Project description:Sugarcane mosaic virus Raw sequence reads

| PRJNA545885 | ENA

Sugarcane streak mosaic virus cultivar:Sugarcane

Project description:Sugarcane streak mosaic virus cultivar:Sugarcane Genome sequencing and assembly

| PRJNA1035926 | ENA

Expression of the host and pathogen genes during sugarcane - S. scitamineum interaction

Project description:According to the key words, the gene set, including oxidation-reduction, RNA silence, disease resistance, phytohormone, phosphorylation, dephosphorylation, transcription factor, receptor, kinase, ubiquitination and RNA binding,etc. from sugarcane and the whole CDS sequence from smut genome, was achieved and used as targets in the present microarray assay. Based on smut infection samples from smut-susceptible sugarcane genotype YC71-374 and smut-resistant sugarcane genotype NCo376, the hybridization was conducted and validated by real-time fluorescent quantitative PCR. It would provide a basic data for the study on sugarcane-smut interaction mechanism, which referred to sugarcane smut resistance and smut pathogenesis.

2022-08-02 | GSE140801 | GEO

MeJA treatment in sugarcane

Project description:Using nylon filter arrays, we analyzed the expression profile of 1536 expressed sequence tags (ESTs) of sugarcane (Saccharum sp.) exposed to the phytormone methyl jasmonate (MeJA) for 0-12 h. 26 ESTs were differentially expressed, including novel genes and also genes that had not previously been reported as being MeJA-inducible. Data are for two independent experiments. Keywords = sugarcane Keywords = methyl jasmonate Keywords = nylon arrays

2010-10-08 | E-GEOD-1546 | biostudies-arrayexpress

MeJA treatment in sugarcane

2004-07-23 | GSE1546 | GEO

Cold stress in sugarcane exp2

Project description:Tropical and subtropical plants are generally sensitive to cold and can show appreciable variation in their response to cold stress when exposed to low positive temperatures. Using nylon filter arrays, we analyzed the expression profile of 1536 expressed sequence tags (ESTs) of sugarcane (Saccharum sp.) exposed to cold for 3-48 h. Thirty-four cold-induced ESTs were identified, of which 23 were novel cold-responsive genes that had not previously been reported as being cold-inducible. This series has the samples from replicate experiment number 2. Keywords = sugarcane Keywords = cold Keywords = nylon arrays

2010-06-05 | E-GEOD-84 | biostudies-arrayexpress

Cold stress in sugarcane exp1

2010-06-05 | E-GEOD-83 | biostudies-arrayexpress