Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genetic sex-determination of ancient horse remains

ABSTRACT: Sexing Viking Age horses from burial and non-burial sites in Iceland using ancient DNA

PROVIDER: PRJEB28294 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR2749100_1.fastq.gz	Fastqsanger.gz
	ERR2749100_2.fastq.gz	Fastqsanger.gz
	ERR2749110_1.fastq.gz	Fastqsanger.gz
	ERR2749110_2.fastq.gz	Fastqsanger.gz
	ERR2749101_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 44

Similar Datasets

Genetic sex-determination of ancient horse remains

Project description:Sexing Viking Age horses from burial and non-burial sites in Iceland using ancient DNA

| PRJEB29661 | ENA

Ancient Oral Pathogens Identified in Viking Teeth

Project description:Ancient Oral Pathogens Identified in Viking Teeth

| PRJEB75954 | ENA

DNA methylation-based profiling of archaeological horse remains for age-at-death and castration

Project description:Epigenetic prediction of age-at-death and castration in ancient horses

| PRJEB56293 | ENA

Ancient nuclear genomes enable repatriation of Indigenous human remains

Project description:For many decades Indigenous people, including Native Americans and Aboriginal Australians, have fought for their return of their ancient people. By sequencing ten ancient nuclear genomes of Aboriginal Australians and 27 mitogenomes from ancient pre-European Aboriginal Australians (up to 1,540 yr BP) of known provenance we demonstrate the feasibility of successfully identifying the geographic origins of unprovenanced ancestral remains using genomic methods.

| EGAS00001003359 | EGA

Metagenomics analysis of ancient human remains

Project description:Metagenomics analysis of ancient human remains

| PRJEB43969 | ENA

Ancient DNA from Viking Age fish

Project description:Ancient DNA reveals the Arctic origin of Viking Age stockfish from Haithabu, Germany

| PRJEB20524 | ENA

Species identification of ancient Lithuanian fish remains using collagen fingerprinting

Project description:Morphological identification of ancient bone is often problematic due to heavy fragmentation that generally influences zooarchaeological assemblages. Fish bones are more taphonomically sensitive than those of other vertebrates as they are typically smaller and less biomineralised. Thus, taxonomic identification based on the preservation of morphological features is often extremely limited and can reduce or eliminate the usefulness of an assemblage for inferring taxon information. Currently, one of the most time- and cost-efficient methods of achieving faunal identity from ancient bone is by the collagen fingerprinting technique known as ZooMS (Zooarchaeology by Mass Spectrometry). ZooMS harnesses the potential of preserved collagen, which is the most dominant and time-stable protein in bone. In this research, ZooMS is applied to ancient Baltic region fish assemblages that are between 500 and 6000 years old in order to define species identity and construct assemblage compositions. Alongside inferences into environmental and biological shifts from the Neolithic era to present day in the Baltic region, we demonstrate for the first time the ability to distinguish between recently diverged members of the Salmo (salmon) and Scophthalmus (turbot) genera. ZooMS analysis highlights 7% of the collagen-containing assemblage as having been morphologically identified incorrectly and has facilitated taxonomic refinement of a further 28% of samples, including some of the morphologically indeterminate bone fragments. This research emphasises the great potential of ZooMS in identifying ichthyoarchaeological bone remains to species-level, and provides a case for the use of collagen fingerprinting in contributing to baseline fisheries and ecological data, to inform modern management.

2018-08-29 | PXD010041 | Pride

ChIP-chip from five horse cells with CENP-A

Project description:In the present study we analyzed centromeric localization on chromosome 11 in different horses and results showed that each individual exhibits a different arrangement of CENP-A binding domains.

2015-01-01 | GSE57986 | GEO

Genome-wide detection by array CGH of copy number variations among diverse horse breeds

Project description:Investigating genome-wide characteristics of CNVs in 6 horses representing 6 distinct breeds by using the aCGH method and performed GO and KEGG analysis for the CNVs genes.This result is an important complement to the mapping of horse whole-genome CNVs and helpful to study plateau horses’ adaption to the plateau’s environment.

2014-02-26 | GSE52504 | GEO

Ancient nuclear genomes enable repatriation of Indigenous human remains

Project description:Ancient nuclear genomes enable repatriation of Indigenous human remains

| PRJEB29663 | ENA