Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Stormwater ponds

ABSTRACT: DNA metabarcoding adds valuable information for management of biodiversity in roadside stormwater ponds

PROVIDER: PRJEB30841 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR3077410_1.fastq.gz	Fastqsanger.gz
	ERR3077410_2.fastq.gz	Fastqsanger.gz
	ERR3077420_1.fastq.gz	Fastqsanger.gz
	ERR3077420_2.fastq.gz	Fastqsanger.gz
	ERR3077430_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 230

Similar Datasets

Using the Daphnia magna Transcriptome to Distinguish Water Source: Wetland and Stormwater Case Studies

Project description:Investigation of mRNA expression (using HiSeq 2500) in response to treatment of Daphnia magna to pyriproxyfen, wetland water, or stormwater samples.

2022-07-26 | GSE208591 | GEO

Sediment Microbial Community from Stormwater Management Structures, MD, USA

Project description:Sediment Microbial Community from Stormwater Management Structures, MD, USA Metagenome

| PRJNA941861 | ENA

Stormwater biofilter soil

Project description:Stormwater biofilter soil Raw sequence reads

| PRJNA939271 | ENA

Stormwater water metagenome

Project description:Stormwater biofiltration system filter media metagenome

| PRJNA835199 | ENA

Connectivity of stormwater ponds impacts Odonata abundance and species richness.

Project description:ContextThe successful dispersal of an animal depends, partly, on landscape connectivity. Urbanization poses risks to dispersal activities by increasing hostile land cover types.ObjectivesWe investigated how connectivity of urban ponds impacted Odonata communities (dragonflies and damselflies), an order of semi-aquatic insects that actively disperse.MethodsWe sampled 41 constructed stormwater ponds and 8 natural ponds in a metropolitan area. The effect of connectivity and the quantity of available adjacent habitats was tested at different scales for dragonflies (900 m) and damselflies (300 m), determined by a literature analysis, to account for differences in suborder dispersal capabilities.ResultsLower levels of connectivity and fewer nearest neighbours negatively impacted abundance, species richness, and composition of dragonflies (p values < 0.01, R2 = 0.18-0.70). Adult dragonfly abundance had a stronger positive relationship with connectivity than species richness. In particular, the abundance of adult dragonfly Leucorrhinia frigida, found almost exclusively at natural ponds, had a positive relationship with connectivity. Connectivity and the number of nearest neighbours had no significant impact on damselflies apart from a slight negative relationship between connectivity and species richness (p value = 0.02, R2 = 0.11). Natural ponds had significantly higher levels of connectivity when compared to stormwater ponds.ConclusionsOur results suggest that dragonflies are positively affected by increased connectivity in an urban landscape, with no benefit of connectivity to damselflies at the scale measured. We recommend intentional planning of urban stormwater pond networks, where individual ponds can act as stepping stones, incorporated with strategic inclusion of beneficial land cover types.Supplementary informationThe online version contains supplementary material available at 10.1007/s10980-024-01817-z.

| S-EPMC10902110 | biostudies-literature

tailing ponds sediment

Project description:tailing ponds sediment Raw sequence reads

| PRJNA431952 | ENA

Impact of environmental factors on aquatic biodiversity in roadside stormwater ponds.

Project description:Constructed stormwater ponds mitigate runoff volumes and pollution, and provide other ecosystem services, such as supporting biodiversity, but these services attracted relatively less attention. The impacts of the pollution levels in the water column and sediments, the physical characteristics of ponds, and the presence of amphibians on the macroinvertebrate community composition and biodiversity were explored in twelve stormwater ponds in Norway. Also, the similarities between macroinvertebrate, zooplankton and plant communities were explored. Most of the taxa displayed in the ordination diagram were positively correlated with the pond size and the number of neighbouring ponds, and negatively correlated with the pollution levels in the water column and sediments. However, no statistically significant impacts on the number of taxa and Shannon index were observed. There were low similarities between the macroinvertebrate and zooplankton community compositions as well as between the plant and macroinvertebrate community compositions in the stormwater ponds. We observed a significant positive correlation between the number of plant and of zooplankton taxa, and a weak non-significant positive correlation between the number of plant and of macroinvertebrate taxa. Overall, the explanatory variables had a significant impact on the community composition, but not on the number of taxa nor Shannon index.

| S-EPMC6461623 | biostudies-literature

seed specific genes-Establishing the network of seed gene expression and analysis of its biodiversity

Project description:gnp3_tri33-arabidoseed - seed specific genes - WP3 : Biodiversity of seed traits : state of the art - This experiment aimed to identify the genes expressed in the seeds vs siliques (easiest to harvest), and to know if the expression pattern of the whole silique could provide a valuable information. Keywords: organ comparison

2009-05-30 | GSE16244 | GEO

seed specific genes-Establishing the network of seed gene expression and analysis of its biodiversity

2010-05-18 | E-GEOD-16244 | biostudies-arrayexpress