Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genomes of soft coal slag Beijerinckiaceae

ABSTRACT: Genome sequences of three Beijerinckiaceae strains isolated from early industrial soft coal slags

PROVIDER: PRJEB32205 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Project description:Genome sequencing of three Beijerinckiaceae strains isolated from early industrial soft coal slags

| PRJNA558391 | ENA

Project description:Bacterial community profiling of early industrial soft coal slags

| PRJNA384238 | ENA

soil metagenome

Project description:Shotgun metagenomics of soft coal slags originating from early industrial mineral leaching

| PRJNA384362 | ENA

Beijerinckiaceae bacterium

Project description:Beijerinckiaceae bacterium overview

| PRJNA531540 | ENA

Buccal epithelial gene expression in smoky and smokeless coal users

Project description:Exposure to indoor air pollution generated from the combustion of solid fuels is a major risk factor for a spectrum of cardiovascular and respiratory diseases, including lung cancer. In Chinaâs rural counties of Xuanwei and Fuyuan, lung cancer rates are among the highest in the country. While the elevated disease risk in this population has been linked to the widespread usage of bituminous (smoky) coal as compared to anthracite (smokeless) coal, the underlying physiologic mechanism that smoky coal induces in comparison to other fuel types is unclear. As we have previously used airway gene-expression profiling to gain molecular insights into the physiologic effects of cigarette smoke, here we profiled the buccal epithelium of residents exposed to the burning of smoky and smokeless coal in order to understand the physiologic effects of solid fuels. Buccal mucosa scrapings were collected from healthy, non-smoking female residents of Xuanwei and Fuyuan counties who burn coal indoors. RNA was isolated and hybridized onto Affymetrix Human gene 1.0 ST GeneChips, capturing the gene-expression response of (n=26) smoky coal users and (n=9) smokeless coal users. 24-hour indoor personal exposure levels (PM2.5, Polycyclic Aromatic Hydrocarbons) were also captured during this sampling period.

2015-11-02 | E-GEOD-64277 | biostudies-arrayexpress

Buccal epithelial gene expression in smoky and smokeless coal users

2015-11-02 | GSE64277 | GEO

Beijerinckiaceae bacterium strain:MG08

Project description:Beijerinckiaceae bacterium strain:MG08 Genome sequencing

| PRJNA418017 | ENA

Beijerinckiaceae bacterium isolate:USCa_MF

Project description:Beijerinckiaceae bacterium isolate:USCa_MF Genome sequencing and assembly

| PRJNA414456 | ENA

Sub-chronic pulmonary transcriptional response to coal tar, a PAH-containing complex mixture, in adult male MutaTMMouse.

Project description:Polycyclic aromatic hydrocarbons (PAHs) are a class of hundreds of structurally similar chemicals ubiquitously present in our environment. They are created during the incomplete combustion of organic materials, such as oil, wood, tobacco, and charbroiled meat. As such, human exposure to mixtures of PAHs can occur through consumption of PAH-containing foods and water, inhalation of polluted air, or dermal contact. Several PAHs have been classified as carcinogenic to humans or probably carcinogenic to humans by the International Agency for Research on Cancer. The mice in this study were exposed to a complex mixture of PAHs - coal tar. In the present study, we sought to determine the dose-dependent changes in gene expression upon oral exposure to this PAH mixture in the lung tissue. Adult male MutaTMMouse were exposed to three doses of the coal tar or vehicle control (olive oil) for 28 days and sacrificed three days after the final exposure.

2017-01-01 | GSE87690 | GEO

Transcriptome analysis of Beijerinckiaceae RH AL1 under methanol oxidation conditions

Project description:Beijerinckiaceae bacterium RH AL1 was grown exponentially in with methanol (1% [v/v]) as carbon source and lanthanum (1µM) as necessary growth supplement. Harvested biomass was subjected to RNA extraction, mRNA-enrichment and Illumina sequencing library preparation for subsequent RNA-Seq analysis. The scope of this gene expression analysis was to validate the expression of genes linked to pathways that are involved in C1-metabolism.

2019-08-08 | E-MTAB-8184 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data