Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Danio species adult skin

ABSTRACT: Transcriptomic analysis of adult skin from 9 Danio species

PROVIDER: PRJEB36360 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR5838120_1.fastq.gz	Fastqsanger.gz
	ERR5838120_2.fastq.gz	Fastqsanger.gz
	ERR5838130_1.fastq.gz	Fastqsanger.gz
	ERR5838130_2.fastq.gz	Fastqsanger.gz
	ERR5838140_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 90

Similar Datasets

Danio Species Sequencing Project - Danio nigrofasciatus

Project description:Danio Species Sequencing Project - Danio nigrofasciatus

| PRJEB2228 | ENA

Danio Species Sequencing Project - Danio albolineatus

Project description:Danio Species Sequencing Project - Danio albolineatus

| PRJEB2227 | ENA

Sequencing of Danio rerio skin for 3 age groups

Project description:Comparison of temporal gene expression profiles from Danio rerio skin. The RNA-seq data comprise 3 age groups at 5, 24 and 30 months. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

2021-10-19 | GSE118608 | GEO

Sequencing of Danio rerio skin for 2 age groups

Project description:Comparison of Danio rerio skin for 2 age groups treated with Rotenone. The RNA-seq data comprises two age groups treated with different Rotenone dose levels. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

2021-10-19 | GSE102433 | GEO

Sequencing of Danio rerio skin for 5 age groups

Project description:Comparison of temporal small RNA gene expression profiles from Danio rerio skin. The smallRNA-seq data comprise 5 age groups at 6, 12, 24, 36 and 42 months. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

2021-10-19 | GSE117820 | GEO

Sequencing of Danio rerio skin for 2 age groups after physical exercise

Project description:Comparison of gene expression profiles from Danio rerio skin for 2 age groups. The RNA-seq data comprise 2 x 2 groups: two age groups, each with and without physical exercise (swim-tunnel). Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

2021-10-19 | GSE102432 | GEO

Sequencing of Danio rerio skin from wildtype and two tert mutant phenotypes (JenAge)

Project description:Comparison of gene expression profiles from Danio rerio skin of wiltype (AB) and homozygote/heterozygote tert mutant phenotypes (AB tert(-/-), AB tert(+/)). The RNA-seq data comprises 3 groups. Jena Centre for Systems Biology of Ageing - JenAge (www.jenage.de)

2021-10-19 | GSE102434 | GEO

Transcriptomic analysis of adult tissue from 12 Danio rerio - Danio aesculapii hybrids

Project description:Danio hybrid adult tissue

| PRJEB53585 | ENA

Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores

Project description:Understanding genetic and cellular bases of adult form remains a fundamental goal at the intersection of developmental and evolutionary biology. The skin pigment cells of vertebrates, derived from embryonic neural crest, are a useful system for elucidating mechanisms of fate specification, pattern formation, and how particular phenotypes impact organismal behavior and ecology. In a survey of Danio fishes, including zebrafish Danio rerio, we identified two populations of white pigment cells—leucophores—one of which arises by transdifferentiation of adult melanophores and another that develops from a yellow/orange xanthophore-like progenitor. Single-cell transcriptomic, mutational, chemical and ultrastructural analyses of zebrafish leucophores revealed cell-type specific chemical compositions, organelle configurations and genetic requirements. At the organismal level, we identified distinct physiological responses of leucophores during environmental background matching and we show that leucophore complement influences behavior. Together, our studies revealed new, independently arisen pigment cell types and mechanisms of fate acquisition in zebrafish, and illustrate how concerted analyses across hierarchical levels can provide insights into phenotypes and their evolution.

2019-05-13 | GSE130526 | GEO

Zebrafish adult skin mpeg+ cells

Project description:Zebrafish adult skin mpeg+ cells

| PRJNA630162 | ENA