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ABSTRACT: Low-coverage whole-genome re-sequencing of European plaice (Pleuronectes platessa)

PROVIDER: PRJEB36564 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	ERR3898710_1.fastq.gz	Fastqsanger.gz
	ERR3898710_2.fastq.gz	Fastqsanger.gz
	ERR3898720_1.fastq.gz	Fastqsanger.gz
	ERR3898720_2.fastq.gz	Fastqsanger.gz
	ERR3898730_1.fastq.gz	Fastqsanger.gz

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Chromosomal microarray analysis for validation of the WGS-based CNV detection results in recurrent miscarriage couples

Project description:In order to validate of CNV detection from low-coverage whole-genome sequencing in the blood samples from recurrent miscarriage couples, we employed a customized array Comparative Genomics Hybridization (aCGH, Agilent) approach as chromosomal microarray analysis (CMA) in present study for a cohort of 78 DNA samples from blood. CMA results were compared with low-coverage whole-genome sequencing detection results. 100% consistency was obtained in pathogenic or likely pathogenic CNVs detection.

2017-11-01 | GSE83941 | GEO

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