Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: H2 driven processes in the root zone of Carex rostrata in summer

PROVIDER: PRJEB37304 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4018510_1.fastq.gz	Fastqsanger.gz
	ERR4018510_2.fastq.gz	Fastqsanger.gz
	ERR4018520_1.fastq.gz	Fastqsanger.gz
	ERR4018520_2.fastq.gz	Fastqsanger.gz
	ERR4018530_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Project description:H2 driven processes in the root zone of Molinia caerulea in summer

| PRJEB37863 | ENA

Project description:Microbial Fermentations in the root zone of Carex rostrata

| PRJEB34444 | ENA

Project description:H2 driven processes in the root zone of Molinia caerulea in spring

| PRJEB38013 | ENA

lpCarRost

Project description:Carex rostrata

| PRJEB68042 | ENA

Carex rostrata

Project description:Carex rostrata overview

| PRJNA1114858 | ENA

lpCarRost1

Project description:Carex rostrata genome assembly, lpCarRost1

| PRJEB75832 | ENA

lpCarRost

Project description:Carex rostrata, genomic and transcriptomic data

| PRJEB68041 | ENA

Transcription profiling by array of Arabidopsis wild type and an ARF7/ARF19 double knockout mutant roots dissected into 5 developmental zones

Project description:Arabidopsis seedlings, of both wild-type and an ARF7/ARF19 double knockout mutant, were grown to 7 days post-germination. The roots were then dissected into 5 developmental zones, the meristem, early elongation zone, late elongation zone, mature root and lateral root zone. The sections then underwent transcriptional profiling to identify processes and regulatory events specific and in common to the zones.

2011-04-13 | E-MEXP-2912 | biostudies-arrayexpress

lpCarRost1 alternate haplotype

Project description:Carex rostrata genome assembly, lpCarRost1, alternate haplotype

| PRJEB75831 | ENA

Gibberellin-deactivating GA2OX enzymes act as a hub for auxin-gibberellin crosstalk in Arabidopsis thaliana root growth regulation

Project description:We combined transcriptomic profiling of auxin related mutants with genetic and biochemical approaches and live-cell imaging techniques of Arabidopsis roots to understand the role of auxin-driven gibberellin level changes during root development, particularly root cell elongation. We show that auxin negatively regulates the level of gibberellin in root elongation zone. Auxin signalling steers the expression of gibberellin deactivating enzymes - GIBBERELLIN 2-OXIDASES (GA2OX) exclusively in root elongation zone. Interestingly, GA2OX8 expression is high in tissues with elevated auxin levels, such as vasculature or stem cell niche, fitting with the observed effect of auxin on gibberellin level. Here we show that GA2OX enzymes are negative regulators of root cell elongation. Gibberellin decrease caused by GA2OX8 overexpression inhibits root cell elongation. In contrast, roots missing GA2OX genes elongate faster. These findings indicate that GA2OX8 enzymes represent an integration core of auxin and gibberellin signalling pathway in root elongation zone, vascular development and regulation of stem cell niche. Our results enhance understanding of complex mechanisms controlling root cell elongation.

2024-12-31 | GSE282145 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data