Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome sequencing of Acropora tenuis from inshore reefs in the central GBR

ABSTRACT: Whole genome sequencing of Acropora tenuis from inshore reefs in the central GBR

PROVIDER: PRJEB37470 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4131330_1.fastq.gz	Fastqsanger.gz
	ERR4131330_2.fastq.gz	Fastqsanger.gz
	ERR4131510_1.fastq.gz	Fastqsanger.gz
	ERR4131510_2.fastq.gz	Fastqsanger.gz
	ERR4131520_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 592

Similar Datasets

Acropora tenuis

Project description:Acropora tenuis Metagenome

| PRJNA434624 | ENA

Acropora tenuis

Project description:Acropora tenuis overview

| PRJNA434767 | ENA

Acropora tenuis

Project description:Genetic variation in Acropora tenuis

| PRJDB6484 | ENA

Acropora tenuis

Project description:Transcriptome analysis of Acropora tenuis

| PRJDB11485 | ENA

Acropora tenuis

Project description:Acropora tenuis larvae infection experiments

| PRJDB8332 | ENA

Acropora tenuis

Project description:Color morphs of the coral Acropora tenuis.

| PRJDB10722 | ENA

Acropora cf. tenuis

Project description:Acropora cf. tenuis Raw sequence reads

| PRJNA1033317 | ENA

Acropora tenuis

Project description:Comparative analysis of gene expression in coral Acropora tenuis exposed to a UV filter or heat stress

| PRJDB18025 | ENA

Acropora tenuis

Project description:Origin of In Vitro Cultured Cells in the Scleractinian Coral, Acropora tenuis with Reference to Larval Nerve and Epithelial Cell Identities

| PRJDB16934 | ENA

The role acclimatization, adaptation, and symbiosis in the acquisition of heat tolerance in reef-building corals

Project description:Transcriptional responses to heat stress were assayed in early life-history stages of 11 crosses between and amongst Acropora tenuis colonies originating from reefs along the Great Barrier Reef. We identified a single nucleotide polymorphism outlier (Fst=0.89) between populations in the unannotated gene Acropora25324, which exhibited constitutively higher gene expression in populations with dams originating from Curd reef, a far north, warm adapted inshore reef, suggesting an important role of this gene in adaptation to warmer environments. Further, juveniles exposed to heat and in symbiosis with heat-evolved Symbiodiniaceae displayed intermediate transcriptional responses between its progenitor taxa (Cladocopium goreaui) and the more stress tolerant Durusdinium trenchii, indicating that the development of heat tolerance acquisition is potentially a conserved evolutionary process in Symbiodiniaceae. These findings reveal the underlying mechanisms, and for the first time, their relative contribution, of coral responses to climate change and provide a foundation for optimizing conservation methods like assistant gene flow.

2022-07-08 | GSE176051 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data