Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Phage to control Aeromonas hydrophila in striped catfish in the Mekong Delta, Vietnam.

PROVIDER: PRJEB38715 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR4235649_1.fastq.gz	Fastqsanger.gz
	ERR4235649_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Comparative genomics of Aeromonas hydrophila and Aeromonas dhakensis causing Motile Aeromonas septicemia in Vietnam striped catfish

Project description:Comparative genomics of Aeromonas hydrophila and Aeromonas dhakensis causing Motile Aeromonas septicemia in Vietnam striped catfish

| PRJEB65955 | ENA

Aeromonas hydrophila/dhakensis genome exploration

Project description:Aeromonas hydrophila ST251 and Aeromonas dhakensis are major emerging pathogens of striped catfish in Vietnam

| PRJEB41556 | ENA

Aeromonas dhakensis is a leading cause of motile Aeromonas septicemia in Vietnamese striped catfish aquaculture

Project description:Aeromonas dhakensis causes motile aeromonas septicaemia in striped catfish.

| PRJEB59357 | ENA

Aeromonas hydrophila whole cell differential proteins

Project description:Differential protein of Aeromonas hydrophila(putative human infections)'s whole cell protein

2022-01-13 | PXD029702 | Pride

Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq

Project description:An integrated approach was used to identify genes associated with resistance to Aeromonas hydrophila, an important bacterial pathogen causing aeromoniasis in rohu Labeo rohita. DNA polymorphism and gene expression profiling in lines of L. rohita selected for resistance or susceptibility to challenge with A. hydrophila, and grown in a common environment, were studied using Illumina mRNA-seq of selectively pooled RNA samples.

2013-01-01 | GSE27994 | GEO

Transcription profiling of C. elegans exposed to several different bacterial pathogens

Project description:Transcritome study of C.elegans exposed to multiple, different bacterial pathogens. Experiments were performed in set-replicates of either 3 or 5.<br> There are 3 for samples: Aeromonas hydrophila, Enterococcus faecalis, Erwinia carotovora and Photorhabdus luminescens. <br> There are 5 for samples: Serratia marcesens and Escherichia coli (control).<br>

2008-02-06 | E-MEXP-766 | biostudies-arrayexpress

Aeromonas hydrophila LC-MSMS - This project was designed to observe changes in proteins expression and toxicity proteins expression of Aeromonas hydrophila under normal and iron restriction conditions.

Project description:This project was designed to observe changes in proteins expression and toxicity proteins expression of Aeromonas hydrophila under normal and iron restriction conditions.

2018-02-16 | PXD007641 | Pride

Expressed sequences and polymorphisms in rohu carp (Labeo rohita, Hamilton) revealed by mRNA-seq

2013-01-01 | E-GEOD-27994 | biostudies-arrayexpress

Skin Deep: Early Mucosal Responses in Blue Catfish (Ictalurus furcatus) Skin to Aeromonas hydrophila Infection

Project description:Fish skin is a critical regulatory organ, serving not only as a physical barrier to pathogen entry, but also as a sophisticated integrator of aquatic environmental, social and nutritional cues through roles in immunity, osmoregulation, and endocrine signaling. Integral to the complexity of teleost skin is the mucus layer secreted by epidermal goblet cells. Pathogen invasion can disrupt this delicate homeostasis with profound impacts on signaling throughout the organism. Here, we investigated the transcriptional effects of virulent A. hydrophila infection in blue catfish skin, Ictalurus furcatus. We utilized an 8X60K Agilent microarray to examine gene expression profiles at critical early timepoints following challenge—2 h, 12 h, and 24 h. Expression of a total of 1,155 unique genes was significantly perturbed during at least one timepoint. We observed dysregulation of a number of genes involved in including antioxidant/apoptosis, cytoskeletal rearrangement, immune response, junctional/adhesion, and proteases. In particular, A. hydrophila infection rapidly altered a number potentially critical lectins, chemokines, interleukins, and other mucosal factors in a manner predicted to enhance its ability to adhere and invade the catfish host. Two-condition experiment, control vs. infected skin. Biological replicates: 3 control replicates, 3 infected replicates.3 timepoints

2014-06-17 | E-GEOD-42491 | biostudies-arrayexpress

Project description:Genome sequencing of Aeromonas hydrophila phage 1233

| PRJNA1043842 | ENA