Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The Diverse Wheat MAGIC Population and its Founders

ABSTRACT: The wheat DIVERSE MAGIC population and founders

PROVIDER: PRJEB39021 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	MAGIC.vcf.gz	Vcf
	MAGIC.vcf.gz.tbi	Vcf
	Founders.vcf.gz	Vcf
	Founders.vcf.gz.tbi	Vcf

Items per page:

1 - 5 of 1885

Similar Datasets

MAGIC RNASeq

Project description:wheat shoots grown on low N from a MAGIC population founders

| PRJEB79052 | ENA

NIAB Elite MAGIC

Project description:Genome assemblies for the eight wheat founders of the NIAB Elite MAGIC experimental population

| PRJEB60701 | ENA

Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions

Project description:We produced RNA-Seq reads from messenger RNA isolated from seedling, root, and floral bud tissue for 17 MAGIC founder accessions (inbred strains) of Arabidopsis thaliana (see Gan et al. 2011. Nature, 477:419-23 for a description of the MAGIC genetic mapping resource). The resulting RNA-Seq data provide a resource to assess tissue-specific expression across different accessions of A. thaliana. Note that comparable read data for accessions Col-0 and Can-0, which are also founders of the MAGIC lines, has previously been released under GEO series GSE30795 (Gan et al. 2011. Nature, 477:419-23).

2013-12-11 | GSE53197 | GEO

Phaseolus vulgaris cultivar:MAGIC population

Project description:Phaseolus vulgaris cultivar:MAGIC population Raw sequence reads

| PRJNA289910 | ENA

Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions

Project description:We have sequenced messenger RNA isolated from seedling tissue for 19 accessions of Arabidopsis thaliana (with biological replication). The 19 accessions for which RNA-Seq reads were collected have served as the founders for the MAGIC lines, a high-resolution recombinant inbred line mapping resource. RNA sequencing data was used to examine differential gene expression among the accessions.

2011-08-29 | GSE30720 | GEO

Seedling transcriptome sequencing of the Arabidopsis thaliana MAGIC founder accessions

2011-08-29 | E-GEOD-30720 | biostudies-arrayexpress

Multiple tissue RNA sequencing of 17 Arabidopsis thaliana MAGIC founder accessions

2013-12-11 | E-GEOD-53197 | biostudies-arrayexpress

Transcriptome analysis of 94 RILs of a maize MAGIC RIL population

Project description:In this study we used a maize multiparental advanced generation intercross (MAGIC) population, originating from nine parental lines (A632, B73, B96, F7, H99, HP301, Mo17, W153R and CML91) followed by 6 generations of self-pollination. A subset of 94 lines was chosen randomly from the set of 529 lines that was genotyped and phenotyped in the field (Dell'Aqua et al (2015) Genome Biology, 16:167) and sampled for RNA seq of proliferative tissue of growing leaf.

2016-02-02 | E-MTAB-3965 | biostudies-arrayexpress

MAGIC-maize genotyping

Project description:MAGIC-maize population: Single Primer Enrichment Technology genotyping

| PRJEB67515 | ENA

Transcriptome analysis of 94 RILs of a maize MAGIC RIL population

Project description:Transcriptome analysis of 94 RILs of a maize MAGIC RIL population

| PRJEB11400 | ENA