Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

BN and SHR rat expression profiling left ventricle

ABSTRACT: BN and SHR rat expression profiling left ventricle

PROVIDER: PRJEB4013 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR296710_1.fastq.gz	Fastqsanger.gz
	ERR296710_2.fastq.gz	Fastqsanger.gz
	ERR296711_1.fastq.gz	Fastqsanger.gz
	ERR296711_2.fastq.gz	Fastqsanger.gz
	ERR296712_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 15

Similar Datasets

BN and SHR rat expression profiling left ventricle

Project description:Gene expression data was generated in BN and SHR rats to correlate gene expression differences with CpG methylation differences detected between the strains by whole-genome bisulfite sequencing.

2013-07-19 | E-MTAB-1702 | biostudies-arrayexpress

Transcription profiling of BXH/HXB rat recombinant inbred strains derived from the spontaneously hypertensive rat (SHR/Ola) and the Brown Norway congenic strains carrying the polydactylyl-luxate mutation (BN-Lx)

Project description:BXH/HXB rat recombinant inbred (RI) strains are derived from the spontaneously hypertensive rat (SHR/Ola) and the Brown Norway congenic strains carrying the polydactylyl-luxate mutation (BN-Lx). Tissue from the apex of left ventricle of the heart was disected from 128 RI SHR/Ola and BN-Lx parental strains, RNA was extracted and labelled and hybridised to Affymetrix Rat Genome 230 2.0 Arrays.

2008-04-01 | E-MIMR-222 | biostudies-arrayexpress

Rattus norvegicus strain:BN/SHR

Project description:Rattus norvegicus BN/SHR liver and heart left ventricle ribozero RNAseq reads

| PRJNA314751 | ENA

Profiling of copy-number variation between BN and SHR rats

Project description:We used Nimblegen HD aCGH to detect copy-number variants between genomes of BN and SHR rats

2010-01-30 | GSE20102 | GEO

Transcription profiling by array of rat liver from recombinant inbred strains derived from BN and SHR rats

Project description:We aimed to identify gene expression profiles/differences between spontaneously hypertensive rat(SHR) and normotensive rat (BN) in a set of recombinant inbred (RI) strains.

2011-07-12 | E-MTAB-323 | biostudies-arrayexpress

Transcription profiling by array of rat aorta from recombinant inbred strains derived from BN and SHR rats

Project description:We aimed to identify gene expression profiles/differences between spontaneously hypertensive rat(SHR) and normotensive rat (BN) in a set of recombinant inbred (RI) strains.

2011-07-12 | E-MTAB-322 | biostudies-arrayexpress

Cap analysis of gene expression (CAGE) tag sequencing from the left ventricle (LV) of SHR and BN rat strains

Project description:Cap analysis of gene expression (CAGE) tag sequencing from the left ventricle (LV) of a rat model of hypertension, the spontaneously hypertensive rat (SHR), and a normotensive strain, the Brown Norway (BN) to understand role of alternative promoter usage in complex disease.

| PRJEB47228 | ENA

Transcription profiling of rat adrenal tissue to identify gene expression differences in spontaneously hypertensive rats (SHR), normotensive rats (BN) and recombinant inbred strains

Project description:We aimed to identify gene expression profiles/differences between spontaneously hypertensive rat(SHR) and normotensive rat (BN) in a set of recombinant inbred (RI) strains.

2008-04-18 | E-TABM-457 | biostudies-arrayexpress

Profiling of copy-number variation between BN and SHR rats

Project description:We used Nimblegen HD aCGH to detect copy-number variants between genomes of BN and SHR rats Comparison of single BN against single SHR individual in a dye-swap experiment

2010-05-15 | E-GEOD-20102 | biostudies-arrayexpress

Transcription profiling of peritoneal fat of SHR/01a (spontaneously hypertensive rat), BN-Lx (Brown Norway congenic carrying polydactyly-luxate syndrome)and recombinant inbred (HXB/BXH) 6-week old rat strains

Project description:Gene expression profiling of peritoneal fat of SHR/01a (spontaneously hypertensive rat), BN-Lx (Brown Norway congenic carrying polydactyly-luxate syndrome)and recombinant inbred (HXB/BXH) 6-week old rat strains.

2010-11-18 | E-AFMX-7 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data