Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Peromyscus maniculatus Genetic Variant Analysis

PROVIDER: PRJEB41333 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	5-10_indel.vcf.gz	Vcf
	5-10_indel.vcf.gz.tbi	Vcf
	5-10_snps.vcf.gz	Vcf
	5-10_snps.vcf.gz.tbi	Vcf
	1-4indel_merged.vcf.gz	Vcf

Items per page:

1 - 5 of 8

Similar Datasets

Whole Transcriptome RNA-seq in primary fibroblasts of outbred Peromyscus maniculatus

Project description:Whole transcriptome RNA sequencing in primary fibroblasts of outbred Peromyscus maniculatus was generated to explore the degree of coordination in gene expression.

2021-06-29 | GSE179058 | GEO

RNA-seq profiling of tissue from deer mouse embryo tails

Project description:We used RNA-seq to compare transcriptional profiles from the embryonic tails from E12.5–E15.5 Peromyscus maniculatus. Samples are from two ecotypes, forest (P.m.nubiterrae) and prairie (P.m.bairdii) with different numbers of caudal vertebrae.

2023-06-01 | GSE191280 | GEO

RNA-seq profiling of tissue from hybrid deer mouse embryo tails

Project description:We used RNA-seq to estimate allelic expression bias in the embryonic tails of E12.5 and E14.5 Peromyscus maniculatus nubiterrae x bairdii. Samples are from F1 hybrids between forest (P.m.nubiterrae) and prairie (P.m.bairdii) with different numbers of caudal vertebrae.

2023-06-01 | GSE191330 | GEO

Cellular evolution of the hypothalamic preoptic area of behaviorally divergent deer mice

Project description:Genetic variation is known to contribute to the variation of animal social behavior, but the molecular mechanisms that lead to behavioral differences are still not fully understood. Here, we investigate the cellular evolution of the hypothalamic medial preoptic area (MPOA), a brain region that plays a critical role in social behavior, across two sister species of deer mice (Peromyscus maniculatus and P. polionotus) with divergent social systems. These two species exhibit large differences in mating and parental care behavior across species and sex. Using single-nucleus RNA-sequencing, we build a molecular atlas of the MPOA for males and females of both Peromyscus species.

2024-08-20 | GSE272719 | GEO

Whole Transcriptome RNA-seq in Brain Tissue of Young and Old Peromyscus maniculatus and P. leucopus

Project description:Whole transcriptome RNA sequencing in brain tissue was generated to explore differences between young and old animals of two closely related species of deer mice (genus Peromyscus) that reportedly differ in their lifespans: P. leucopus that lives for up to 8 years and P. maniculatus that exhibits a lifespan of about 4 years.

2021-03-31 | GSE166394 | GEO

Peromyscus maniculatus

Project description:Peromyscus maniculatus Genomic Resources

| PRJNA777211 | ENA

Peromyscus maniculatus

Project description:Peromyscus maniculatus Random survey

| PRJNA271314 | ENA

Peromyscus maniculatus bairdii

Project description:Peromyscus maniculatus bairdii Organism overview

| PRJNA242265 | ENA

Peromyscus maniculatus

Project description:Peromyscus maniculatus Targeted Locus (Loci)