Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IlPhlMeti

ABSTRACT: Phlogophora meticulosa (angle shades), genomic and transcriptomic data

PROVIDER: PRJEB42108 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR6002732_1.fastq.gz	Fastqsanger.gz
	ERR6002732_2.fastq.gz	Fastqsanger.gz
	ERR6002733_1.fastq.gz	Fastqsanger.gz
	ERR6002733_2.fastq.gz	Fastqsanger.gz
	ERR6002734_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 15

Similar Datasets

ilPhlMeti

Project description:Phlogophora meticulosa (angle shades)

| PRJEB42141 | ENA

ilPhlMeti2

Project description:Phlogophora meticulosa (angle shades) genome assembly, ilPhlMeti2

| PRJEB41949 | ENA

ilPhlMeti2 alternate haplotype

Project description:Phlogophora meticulosa (angle shades) genome assembly, ilPhlMeti2, alternate haplotype

| PRJEB41950 | ENA

ilEupLuci

Project description:Euplexia lucipara (small angle shades), genomic and transcriptomic data

| PRJEB46838 | ENA

Phlogophora meticulosa

Project description:Phlogophora meticulosa overview

| PRJNA693949 | ENA

ilEupLuci

Project description:Euplexia lucipara (small angle shades)

| PRJEB46851 | ENA

ilEupLuci1

Project description:Euplexia lucipara (small angle shades) genome assembly, ilEupLuci1

| PRJEB49080 | ENA

ilMacLitu

Project description:Macaria liturata (tawny-barred angle), genomic and transcriptomic data

| PRJEB70738 | ENA

ilEupLuci1 alternate haplotype

Project description:Euplexia lucipara (small angle shades) genome assembly, ilEupLuci1, alternate haplotype

| PRJEB49081 | ENA

RNA-seq of Solanum lycopersicum cv. M82 and S. pennellii introgression line 3-5 day old root tip tissue

Project description:The goal of this study was to perform RNA-seq expression analysis on Solanum lycopersicum cv. M82 X S. pennellii introgression lines, deriving expression Quantitative Trait Loci which were analyzed together with pre-existing genomic and phenotypic data to define genes and regulatory pathways controlling tomato root development and observed natural variation. We completed the RNAseq expression profiling analysis and developed a tool to display this information graphically in collaboration with Nicholas Provart at the University of Toronto: http://bar.utoronto.ca/efp_tomato/cgi-bin/efpWeb.cgi?dataSource=ILs_Root_Tip_Brady_Lab To identify candidate genes and pathways we focussed on one root growth trait, root growth angle, and identified two statistically significant genomic regions within tomato root growth angle QTL containing two candidate genes that likely control the gravitropic setpoint angle (CDC73 and PAP27), both of which are conserved between Arabidopsis and tomato, and which we tested using transgenic lines of the Arabidopsis orthologs. A possible regulatory role for suberin in root growth angle control was also identified.

2018-01-01 | GSE87162 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data