Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IdSyrPipi

ABSTRACT: Syritta pipiens (thick-legged hoverfly)

PROVIDER: PRJEB42144 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR12245502_1.fastq.gz	Fastqsanger.gz
	ERR12245502_2.fastq.gz	Fastqsanger.gz
	ERR6002574_1.fastq.gz	Fastqsanger.gz
	ERR6002574_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

idSyrPipi1

Project description:Syritta pipiens (thick-legged hoverfly) genome assembly, idSyrPipi1

| PRJEB41892 | ENA

idSyrPipi

Project description:Syritta pipiens (thick-legged hoverfly), genomic and transcriptomic data

| PRJEB42079 | ENA

idSyrPipi1 alternate haplotype

Project description:Syritta pipiens (thick-legged hoverfly) genome assembly, idSyrPipi1, alternate haplotype

| PRJEB41891 | ENA

Syritta pipiens

Project description:Syritta pipiens overview

| PRJNA687079 | ENA

Project description:DNA extraction of Syritta pipiens

| PRJNA727697 | ENA

Syritta pipiens

Project description:Syritta pipiens Raw sequence reads

| PRJNA727534 | ENA

RNA-sequencing of Culex pipiens molestus and Culex pipiens quinquefasciatus

Project description:Culex pipiens molestus and Cx. p. quinquefasciatus are the members of Culex pipiens Complex, but they display relatively large differences in behavior and physiological responses. We compared the genes of these mosquitoes to identify those that were differentially expressed in each subspecies. Such genes could play important roles in subspecies-specific blood feeding or oviposition behavior. Culex pipiens molestus and Cx. p. quinquefasciatus females were undertaken Illumina RNA sequencing.

2014-06-26 | E-GEOD-58835 | biostudies-arrayexpress

RNA-sequencing of Culex pipiens molestus and Culex pipiens quinquefasciatus

2014-06-26 | GSE58835 | GEO

Culex pipiens pallens and Cx. p. quinquefasciatus with different resistant level

Project description:Culex pipiens pallens and Cx. p. quinquefasciatus are important vectors of many diseases, such as West Nile fever and lymphatic filariasis. The widespread use of insecticides to control these disease vectors and other insect pests has led to insecticide resistance becoming common in these species. High throughput screening using SSH and specific microarray platforms was thought to have identified some resistance-related genes. However, limitations of these methods meant that only a few hundred of the many thousand genes could be screened. It wasn’t until the sequencing of the Cx. quinquefasciatus genome in 2010 that it became possible to screen all 18.9 thousand genes in the mosquito genome for anti-insecticidal activity. We used high throughout Illumina sequencing to identify hundreds of Cx. p. pallens and Cx. p. quinquefasciatus genes that were differentially expressed in response to pesticide exposure. The identification of these genes is a vital first step for more detailed investigation of the molecular mechanisms involved in insecticide resistance in mosquitoes. In this study, larvae of Cx. pipiens pallens and Cx. pipiens quinquefasciatus were collected from field and transported to the laboratory and reared to adulthood to get F1 generation. Then, half of the F1 generation was conducted to pesticide bioassay. RNA extraction and Illumina sequencing were undertaken in another half of the F1 generation. Therefore, Samples used in Illumina sequencing did not contact any insecticides. Twelve Cx. pipiens pallens and Cx. pipiens quinquefasciatus lavae were undertaken Illumina RNA sequencing.

2014-05-07 | E-GEOD-57307 | biostudies-arrayexpress

Culex quinquefasciatus Jpal-per strain vs. Ogasawara strain

Project description:A pyrethroid-resistant strain of Culex quinquefasciatus, JPal-per, exhibits 2500-fold greater larval resistance to permethrin than the insecticide-susceptible strain Ogasawara. An increased microsome monooxygenase metabolism is involved in the resistance mechanism. Microarray analysis revealed altered expressions of cytochrome P450 genes in the fourth instar larvae of JPal-per compared to those in OGS. An oligo DNA array was designed for 62 different cDNA segments encoding unique P450 isoforms of the Cx. pipiens complex. Other probes for non-P450 Cx. pipiens complex genes were also mounted on the array.

2010-02-23 | GSE17326 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data