Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IyVesVulg

ABSTRACT: Vespula vulgaris (common wasp), genomic and transcriptomic data

PROVIDER: PRJEB43791 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR6054670_1.fastq.gz	Fastqsanger.gz
	ERR6054670_2.fastq.gz	Fastqsanger.gz
	ERR6054671_1.fastq.gz	Fastqsanger.gz
	ERR6054671_2.fastq.gz	Fastqsanger.gz
	ERR6054672_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 17

Similar Datasets

iyVesVulg

Project description:Vespula vulgaris (common wasp)

| PRJEB43808 | ENA

iyVesVulg1

Project description:Vespula vulgaris (common wasp) genome assembly, iyVesVulg1

| PRJEB44008 | ENA

iyVesGerm

Project description:Vespula germanica (German wasp), genomic and transcriptomic data

| PRJEB43736 | ENA

iyVesVulg1 alternate haplotype

Project description:Vespula vulgaris (common wasp) genome assembly, iyVesVulg1, alternate haplotype

| PRJEB44007 | ENA

Pathogen or enemy release in invasive wasps?

Project description:No evidence of enemy release in pathogen and microbial communities of common wasps (Vespula vulgaris) in their native and introduced range

2018-10-19 | PXD001586 | Pride

aLisVul

Project description:Lissotriton vulgaris (common newt), genomic and transcriptomic data

| PRJEB69289 | ENA

iyVesGerm

Project description:Vespula germanica (German wasp)

| PRJEB43741 | ENA

Vespula vulgaris

Project description:Vespula vulgaris overview

| PRJNA724784 | ENA

Project description:Vespula vulgaris virus discovery

| PRJNA740346 | ENA

Shotgun proteomics analysis of saliva and salivary gland tissue from the common octopus Octopus vulgaris

Project description:The saliva of the common octopus (Octopus vulgaris) has been the subject of biochemical study for over a century. A combination of bioassays, behavioural studies and molecular analysis on O. vulgaris and related species suggests that it should contain a mixture of highly potent neurotoxins and degradative proteins. However, a lack of genomic and transcriptomic data has meant that the amino acid sequences of these proteins remain almost entirely unknown. To address this, we assembled the salivary gland transcriptome of O. vulgaris and combined it with high resolution mass spectrometry data from the posterior and anterior salivary glands of two adults, the posterior salivary glands of six paralarvae and the saliva from a single adult. We identified a total of 2810 protein groups from across this range of salivary tissues and age classes, including 84 with homology to known venom protein families. Additionally, we found 21 short secreted cysteine rich protein groups of which 12 were specific to cephalopods. By combining protein expression data with phylogenetic analysis we demonstrate that serine proteases expanded dramatically within the cephalopod lineage and that cephalopod specific proteins are strongly associated with the salivary apparatus.

2018-09-24 | PXD010298 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data