Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The genome of Parnassius apollo, a flagship species for conservation biology

ABSTRACT: In this study, we present the reference genome for the Parnassius apollo butterfly.

PROVIDER: PRJEB44393 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR6895942.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Parnassius smintheus

Project description:Parnassius smintheus (Rocky Mountain apollo butterfly), ilParSmin1

| PRJNA1201885 | ENA

Parnassius smintheus

Project description:Parnassius smintheus (Rocky Mountain apollo butterfly) genomic and transcriptomic data

| PRJNA1202173 | ENA

Parnassius apollo

Project description:Target enrichment sequencing data for the genus Parnassius

| PRJNA914874 | ENA

A Chromosome-Level Genome Assembly and Annotation for the Clouded Apollo Butterfly (Parnassius mnemosyne): A Species of Global Conservation Concern.

Project description:The clouded apollo (Parnassius mnemosyne) is a palearctic butterfly distributed over a large part of western Eurasia, but population declines and fragmentation have been observed in many parts of the range. The development of genomic tools can help to shed light on the genetic consequences of the decline and to make informed decisions about direct conservation actions. Here, we present a high-contiguity, chromosome-level genome assembly of a female clouded apollo butterfly and provide detailed annotations of genes and transposable elements. We find that the large genome (1.5 Gb) of the clouded apollo is extraordinarily repeat rich (73%). Despite that, the combination of sequencing techniques allowed us to assemble all chromosomes (nc = 29) to a high degree of completeness. The annotation resulted in a relatively high number of protein-coding genes (22,854) compared with other Lepidoptera, of which a large proportion (21,635) could be assigned functions based on homology with other species. A comparative analysis indicates that overall genome structure has been largely conserved, both within the genus and compared with the ancestral lepidopteran karyotype. The high-quality genome assembly and detailed annotation presented here will constitute an important tool for forthcoming efforts aimed at understanding the genetic consequences of fragmentation and decline, as well as for assessments of genetic diversity, population structure, inbreeding, and genetic load in the clouded apollo butterfly.

| S-EPMC10901555 | biostudies-literature

Parnassius

Project description:Parnassius spp. Genomic Resources

| PRJNA765655 | ENA

Parnassius

Project description:Genomic sequencing of Parnassius

| PRJNA846070 | ENA

Parnassius glacialis

Project description:Analyses of population structure of a Japanese clouded butterfly Parnassius citrinarius by single nucleotide polymorphism (SNP)

| PRJDB18437 | ENA

Parnassius imperator

Project description:Parnassius imperator overview

| PRJNA944292 | ENA

Parnassius glacialis

Project description:Parnassius glacialis overview

| PRJNA1200192 | ENA

Parnassius smintheus

Project description:Parnassius smintheus overview

| PRJNA818752 | ENA