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IlApoCrat

ABSTRACT: Aporia crataegi (black veined white)

PROVIDER: PRJEB45674 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
		Other
	ERR6363320_1.fastq.gz	Fastqsanger.gz
	ERR6363320_2.fastq.gz	Fastqsanger.gz
	ERR6363321_1.fastq.gz	Fastqsanger.gz
	ERR6363321_2.fastq.gz	Fastqsanger.gz

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1 - 5 of 14

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Project description:Aporia crataegi (black veined white) genome assembly, ilApoCrat1

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The last days of the Aporia crataegi (L.) in Britain: evaluating genomic erosion in an extirpated butterfly

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Affymetrix SNP array data for Dwarf and Rhode Island Red chicken samples

Project description:The genetic foundation of chicken tail feather color is not very well studied to date, though that of body feather color is extensively explored. In the present study, we used a synthetic chicken dwarf line (DW), which was originated from the hybrids between a black tail chicken breed, Rhode Island Red (RIR) and a white tail breed, Dwarf Layer (DL), to understand the genetic rules of the white/black tail color. The DW line still contain the individuals with black or white tails, even if the body feather are predominantly red, after more than ten generation of self-crossing and being selected for the body feather color. We firstly performed four crosses using the DW line chickens including black tail male to female, reciprocal crosses between the black and white, and white male to female to elucidate the inheritance pattern of the white/black tail. We found that (i) the white/black tail feather colors are independent of body feather color and (ii) the phenotype are autosomal simple trait and (iii) the white are dominant to the black in the DW lines. Furtherly, we performed a genome-wide association (GWA) analysis to determine the candidate genomic regions underlying the tail feather color by using black tail chickens from the RIR and DW chickens and white individuals from DW lines.

2019-05-02 | GSE130568 | GEO

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Project description:Siona lineata (black-veined moth)

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ilApoCrat1.Wolbachia_sp_1.1

Project description:Wolbachia endosymbiont (group B) of Aporia crataegi genome assembly, ilApoCrat1.Wolbachia_sp_1.1

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ilPieNapi

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Skin transcriptome profiles associated with black- and white-coated region in a crossbred goat

Project description:we compared the skin transcriptomes of the black- and white-coated region from the Boer and Macheng Black crossbred goat with black head and white body using the Illumina RNA-Seq method. Six cDNA libraries derived from skin samples of the white coat region (n = 3) and black coat region (n = 3) were constructed from three full-sib goats. On average, we obtained approximately 76.5 and 73.5 million reads for each skin sample of black coat and white coat, respectively, of which 75.39% and 76.05% reads were covered in the genome database. Our study provides insight into the transcriptional regulation of two distinct coat color that might serve as a key resource for understanding coat color pigmentation of goat.

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