Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Korean T2D microbiome study

ABSTRACT: 16S metagenome of Korean T2D cohort

PROVIDER: PRJEB45895 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR6118200_1.fastq.gz	Fastqsanger.gz
	ERR6118200_2.fastq.gz	Fastqsanger.gz
	ERR6118210_1.fastq.gz	Fastqsanger.gz
	ERR6118210_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 429

Similar Datasets

Korean Association Resource (KARE) T2D-GENES Exome Sequencing Study

Project description:Korean Association Resource (KARE) T2D-GENES Exome Sequencing Study

| PRJNA316763 | ENA

Human gut microbiome in Korean NAFLD cohort

Project description:Human gut microbiome in Korean NAFLD cohort

| PRJEB27662 | ENA

Lung microbiome enriched with anaerobes associated with Th17 immune phenotype

Project description:In a prior report, we observed two distinct lung microbiomes in healthy subjects that we termed â??pneumotypesâ??: pneumotypeSPT, characterized by high bacterial load and supraglottic predominant taxa (SPT) such as the anaerobes Prevotella and Veillonella; and pneumotypeBPT, with low bacterial burden and background predominant taxa (BPT) found in the saline lavage and bronchoscope. Here, we determined the prevalence of these two contrasting lung microbiome types, in a multi-center study of healthy subjects. We confirmed that a lower airway microbiome enriched with upper airway microbes (pneumotypeSPT) was present in ~45% of healthy individuals. Cross-sectional Multicenter cohort. BAL of 49 healthy subjects from three cohort had their lower airway microbiome assessed by 16S rDNA sequencing and microbial gene content (metagenome) was computationally inferred from taxonomic assignments. The amplicons from total 100 samples are barcoded; the barcode and other clinical characteristics (e.g. inflammatory biomarkers and metabolome data) for each sample are provided in the 'Pneumotype.sep.Map.A1.txt' file.

2016-03-29 | E-GEOD-74395 | biostudies-arrayexpress

Korea T2D-GENES Exome Sequencing Study

Project description:Korea T2D-GENES Exome Sequencing Study

| PRJNA391757 | ENA

FHS T2D-GENES Exome Sequencing Study

Project description:FHS T2D-GENES Exome Sequencing Study

| PRJNA472837 | ENA

Ashkenazi T2D-GENES Exome Sequencing Study

Project description:Ashkenazi T2D-GENES Exome Sequencing Study

| PRJNA316640 | ENA

Singapore T2D-GENES Exome Sequencing Study

Project description:Singapore T2D-GENES Exome Sequencing Study