Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wheat microbiome

ABSTRACT: the rhizobacterial microbiome of different wheat genotypes and species

PROVIDER: PRJEB46385 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR6318780_1.fastq.gz	Fastqsanger.gz
	ERR6318780_2.fastq.gz	Fastqsanger.gz
	ERR6318790_1.fastq.gz	Fastqsanger.gz
	ERR6318790_2.fastq.gz	Fastqsanger.gz
	ERR6318800_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 414

Similar Datasets

wheat rhizosphere microbiome

Project description:rhizobacterial communities of wheat species and genotypes

| PRJEB46375 | ENA

Differential gene expression during cold-acclimation in barley, wheat and rye

Project description:The present transcript profiling compares the gene expression during cold-acclimation in different genotypes of barley (Hordeum vulgare L.), wheat (Triticum aestivum L.) and rye (Secale cereale L.) in order to determine factors influencing frost tolerance. Because of its outstanding robustness against adverse environmental conditions rye is considered to be a model species for abiotic stress tolerance. Wheat is moderate frost-tolerant and barley is most sensitive species in this study. The aim of this study elucidate conserved, as well as, species-specific gene regulation across the Triticeae. Furthermore, transcript abundances were correlated between the distinct frost tolerances of genotypes within each species in order to find candidate genes for frost tolerance.

2013-11-30 | GSE47882 | GEO

Wheat microbiome

Project description:Wheat tissue associated microbiome sequencing

| PRJNA790613 | ENA

Aluminum stress study in wheat and wheat-rye addition lines 3R and 6R.

Project description:Transcriptional profiling of three different genotypes (wheat cv Chinese Spring, and the wheat-rye addition lines 3R and 6R) comparing control and 24h exposure to 200 μM de AlCl3. The goal was to determine the effects of AlCl3 on global gene expression in each genotype and study the differences between them.

2017-03-17 | GSE96739 | GEO

Wheat drought responses

Project description:Three wheat genotypes were exposed to water stress and root tissue collected for expression analysis

2013-05-03 | GSE42214 | GEO

Differential transcriptome analyses of three wheat genotypes in their response to Fusarium Head Blight and trichothecenes

Project description:Fusarium Head Blight (FHB) is a disease of wheat and other cereal crops, where Fusarium graminearum and related species infects the wheat inflorescence during and post-anthesis. The fungus produces trichothecene toxins that accumulate in the grain of infected head, and are required for disease spread. Microarrays were used to observe differential gene expression in the uninoculated spikelets of FHB-challenged wheat spikes in three wheat genotypes. A summary of our findings will be published in Plant Pathology.

2011-09-01 | GSE28973 | GEO

Mechanism Behind Stay Green Trait in Bread Wheat (Triticum aestivum L.)

Project description:Two different wheat genotypes were treated with the high temperature and control conditions under full irrigated condition. Leaf tissues were collected for all 2-different treatments with six replicates after 7 and 10 days of high temperature treatment.

2017-09-21 | ST000886 | MetabolomicsWorkbench

Drought responsiveness dynamics in wheat

Project description:Wheat seedling root transcritpome under well watered and water limited treatments for two genotypes, Svevo and IL20-2

2020-12-18 | GSE163450 | GEO

Project description:Seed microbiome of different wheat genotypes

| PRJNA954583 | ENA

Comparative transcriptional profiling of developing wheat grains with contrasting levels of minerals

Project description:Transcriptional comparison of developing grains between two wheat genotypes with contrasting levels of minerals in grain, using Affymetrix GeneChip® Wheat Genome Array.

2014-10-31 | GSE56032 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data