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DaSolDulc

ABSTRACT: Solanum dulcamara, genomic and transcriptomic data

PROVIDER: PRJEB47298 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	ERR6688681_1.fastq.gz	Fastqsanger.gz
	ERR6688681_2.fastq.gz	Fastqsanger.gz
	ERR6688682_1.fastq.gz	Fastqsanger.gz
	ERR6688682_2.fastq.gz	Fastqsanger.gz
	ERR6688683_1.fastq.gz	Fastqsanger.gz

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Effects of Drought and Flooding on Herbivore-Triggered Transcriptomic Response in Solanum dulcamara

Project description:We use Solanum dulcamara subjected to drought or flooding and damaged by Spodoptera exigua to analyze such interactions at multiple levels. Drought and herbivory caused comparable effects on S. dulcamara physiological response, which was reflected by a considerable overlap in S. dulcamara transcriptomic profiles. This included many defense responses and genes involved in biosynthesis of secondary metabolites that were induced by drought and herbivory but repressed by flooding. Furthermore, combination of drought and herbivory additively induced a part of these herbivore-induced responses suggesting that drought-stressed plants were more resistant. Our study provides concrete evidence of how abiotic stresses differentially affect the plant complex hormonal interactions to fine-tune plant responses to insects.

2016-05-27 | GSE69648 | GEO

daSolDulc

Project description:Solanum dulcamara

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Project description:Solanum dulcamara genome

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PPH22 - various plant species in negative ionisation mode

Project description:MS2 spectra of Capsicum annuum; Cucurbita pepo; Cucumis sativus; Datura stramonium; Petunia axillaris; Petunia exserta; Pisum sativum; Solanum arcanum; Solanum chilense; Solanum dulcamara; Solanum habrochaites; Solanum lycopersicum; Solanum nigrum; Solanum pennelli; Solanum peruvianum; Solanum pimpinellifolium; Solanum tuberosum; Trifolium pratense; Withania somnifera obtained via liquid chromatograohy / Q exactive mass spectrometry in positive ionisation mode.

2023-01-10 | MSV000091039 | MassIVE

PPH22 - various plant species in positive ionisation mode

Project description:MS2 spectra of Capsicum annuum; Cucurbita pepo; Cucumis sativus; Datura stramonium; Petunia axillaris; Petunia exserta; Pisum sativum; Solanum arcanum; Solanum chilense; Solanum dulcamara; Solanum habrochaites; Solanum lycopersicum; Solanum nigrum; Solanum pennelli; Solanum peruvianum; Solanum pimpinellifolium; Solanum tuberosum; Trifolium pratense; Trifolium repens; Withania somnifera obtained via liquid chromatograohy / Q exactive mass spectrometry in positive ionisation mode.

2023-01-10 | MSV000091035 | MassIVE

daSolDulc1

Project description:Solanum dulcamara genome assembly, daSolDulc1

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Solanum dulcamara's response to insect eggs comprises ovicidal hydrogen peroxide production

Project description:Plants can respond to insect oviposition but little is known about which responses directly target the insect eggs and how. Here, we reveal a mechanism by which the bittersweet nightshade, Solanum dulcamara, kills the eggs of a generalist noctuid herbivore. The plant responded at the site of oviposition by Spodoptera exigua with neoplasm and chlorotic tissue formation, accumulation of reactive oxygen species and induction of defence genes and proteins. Transcriptome analysis revealed that these responses were reflected in the transcriptional reprogramming of the egg-laden leaf. The plant-mediated egg mortality on S. dulcamara was not present on a genotype lacking chlorotic leaf tissue at the oviposition sites on which the eggs are exposed to less hydrogen peroxide. As exposure to hydrogen peroxide increased egg mortality, while catalase supplementation prevented the plants from killing the eggs, our results suggest that ROS formation directly acts as an ovicidal plant response of S. dulcamara.

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Project description:Solanum dulcamara Transcriptome or Gene expression

| PRJNA194608 | ENA

daSolNigr

Project description:Solanum nigrum (black nightshade), genomic and transcriptomic data

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