Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Seventh pandemic Vibrio cholerae O1 El Tor, Algeria

ABSTRACT: Seventh pandemic Vibrio cholerae O1 El Tor, Algeria

PROVIDER: PRJEB48258 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR7135490_1.fastq.gz	Fastqsanger.gz
	ERR7135490_2.fastq.gz	Fastqsanger.gz
	ERR7135570_1.fastq.gz	Fastqsanger.gz
	ERR7135570_2.fastq.gz	Fastqsanger.gz
	ERR7139720_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 66

Similar Datasets

Transcriptional response to overexpressing Vibrio Seventh Pandemic -II island encoded genes

Project description:Purpose: to characterize the regulatory targets of an AraC-like transcriptional regulator (VC0513) encoded on the Vibrio Seventh Pandemic Island -II (VSP-II) in V. cholerae O1 El Tor N16961 Methods: RNA was isolated from a wild-type N16961 carrying an IPTG-inducible copy of vc0513, vc0515, or an empty vector control Results: vc0513 induction significantly increased expression of other VSP-II encoded genes relative to the empty vector control Conclusions: our study represents the first analysis of a transcriptional regulator encoded on the VSP-II island

2021-05-08 | GSE174028 | GEO

Genomic study of seventh pandemic Vibrio cholerae El Tor isolates from the Democratic Republic of Congo

Project description:Genomic study of seventh pandemic Vibrio cholerae El Tor isolates from the Democratic Republic of Congo

| PRJEB47296 | ENA

Vibrio cholerae: Wild type El Tor biotype versus crp mutant

Project description:Transcriptional profiling of an El Tor biotype crp mutant The virulent V. cholerae El Tor Ogawa strain C7258 (Peru isolate 1991) and an isogenic deletion mutant (WL7258) lacking DNA sequences encoding the cAMP receptor protein were grown in LB medium to optical density at 600 nm of 1.5. The cultures were chilled in ice, cells quickly collected by centrifugation and total RNA imediately extracted. RNAwas extracted and purified using the Trizol plus RNA purification system (Invitrogen) followed RNEasy miniElute cleanup (Qiagen). RNA samples were conserved at - 80 C and used within a week. Keywords: Genetic modification

2007-12-31 | GSE7519 | GEO

Vibrio cholerae: Wild type El Tor biotype versus crp mutant

2010-05-27 | E-GEOD-7519 | biostudies-arrayexpress

O1 El Tor Vibrio cholerae

Project description:Genome sequence of O1 El Tor V. cholerae in 7th cholera pandemic

| PRJEB6767 | ENA

Project description:Seventh pandemic Vibrio choleare O1 El Tor variant

| PRJNA970544 | ENA

Transcriptional response to overexpressing Vibrio Seventh Pandemic -II island encoded genes

Project description:Transcriptional response to overexpressing Vibrio Seventh Pandemic -II island encoded genes

| PRJNA727981 | ENA

The seventh pandemic of cholera in Europe revisited by microbial genomics

Project description:The seventh pandemic of cholera in Europe revisited by microbial genomics

| PRJEB38484 | ENA

The seventh pandemic Vibrio cholerae O1 El Tor isolate in China has undergone genetic shifts.

Project description:A total of 330 clinical Vibrio cholerae O1 serogroups from China dating between 1961 and 2010 were investigated. By phenotypic biotyping and genetic analysis, during the seventh pandemic of V. cholerae O1 in China, the isolates of hybrid biotype (mixed classical phenotypes) were present during the entire1961-2010 period, while El Tor genetic shifts appeared in 1992 and replaced the prototype El Tor from 2002 to 2010.

| S-EPMC3957781 | biostudies-literature

Vibrio cholerae strain:El Tor C6706

Project description:Vibrio cholerae strain:El Tor C6706 Raw sequence reads

| PRJNA856440 | ENA