Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Eimeria praecox genome

ABSTRACT: In a collaboration between Welcome Trust Sanger Institute (WTSI), Royal Veterinary College (RVC) and King Abdullah University of Science and Technology (KAUST), we have sequenced, assembled and annotated the genome of Eimeria praecox Houghton.

PROVIDER: PRJEB4836 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR357192_1.fastq.gz	Fastqsanger.gz
	ERR357192_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Eimeria brunetti genome

Project description:In a collaboration between Welcome Trust Sanger Institute (WTSI), Royal Veterinary College (RVC) and King Abdullah University of Science and Technology (KAUST), we have sequenced, assembled and annotated the genome of Eimeria brunetti Houghton.

| PRJEB4834 | ENA

Eimeria acervulina genome

| PRJEB4832 | ENA

Eimeria necatrix genome

| PRJEB4833 | ENA

Eimeria mitis genome

Project description:In a collaboration between Wellcome Trust Sanger Institute (WTSI), Royal Veterinary College (RVC) and King Abdullah University of Science and Technology (KAUST), we have sequenced, assembled and annotated the genome of Eimeria mitis Houghton.

| PRJEB4835 | ENA

Eimeria maxima genome

| PRJEB4864 | ENA

Global transcriptome of CFA/I expressing ETEC H10407 under in vitro growth and water stress

Project description:Enterotoxigeneic Escherichia coli (ETEC) is a leading cause of diarrhoeal infections in young children living in endemic regions in low and middle-income countries and adults travelling to these destinations. CFA/I fimbriae have been identified as the predominant colonisation factor associated with human ETEC infections. Here we used used Transposon-directed insertion-site sequencing (TraDIS) and transcriptomic analysis to identify the essential genome of the prototypical CFA/I expressing ETEC strain H10407 and uncover the survival mechanisms that enhance persistence of ETEC isolates in water and within mammalian hosts. RNA transcription profiles of H10407 were identified under different in vitro growth conditions including aerobic growth in neutral LB media (pH7); aerobic growth in acidic media (pH5); aerobic growth in alkaline media (pH9); anaerobic growth in neutral LB media (pH7); and survival in fresh water. Research work including RNA preparation and bioinformatics and statistical analyses were conducted at the Wellcome Trust Sanger Institute (WTSI) and the Westmead Institute for Medical Research (WIMR), the University of Sydney. The sequencing data was generated in the Bioscience Core Laboratory at King Abdullah University of Science and Technology (KAUST).

2021-04-21 | E-MTAB-9364 | biostudies-arrayexpress

Phyllostachys praecox

Project description:Phyllostachys praecox

| PRJNA295343 | ENA

Lindera praecox

Project description:Lindera praecox overview

| PRJNA717090 | ENA

Chimonanthus praecox

Project description:Chimonanthus praecox overview

| PRJNA492351 | ENA

Sundasalanx praecox

Project description:Sundasalanx praecox overview