Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Population structure and gene flow of eelgrass

ABSTRACT: Population structure and gene flow of eelgrass

PROVIDER: PRJEB50028 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR7994640_1.fastq.gz	Fastqsanger.gz
	ERR7994640_2.fastq.gz	Fastqsanger.gz
	ERR7994650_1.fastq.gz	Fastqsanger.gz
	ERR7994650_2.fastq.gz	Fastqsanger.gz
	ERR7994660_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 82

Similar Datasets

Genome-wide Investigation of Population Structure in Myanmar

Project description:Myanmar locates in the crossroads of South Asia, Southeast Asia, and East Asia, and is known for high culture diversity in different ethnic groups. It is considered to be important for understanding human evolutionary history and genetic diversity in East Eurasia. However, relatively few studies have examined the population structure and demographic history in Myanmar to date. In this study, we analyzed more than 220,000 genome-wide SNPs in 175 new samples of five ethnic groups from Myanmar and compared them with the published data. Our results showed that the Myanmar population is intricately substructured, with the main observed clusters corresponding roughly to western/northern highlanders (Chin, Naga, and Jingpo) and central/southern lowlanders (Bamar and Rakhine). The gene flow inferred from South Asia has a substantial influence (~11%) on the gene pool of central/southern lowlanders rather than western/northern highlanders. The genetic admixture is dated around 650 years ago. These findings suggest that the genome-wide variation in Myanmar was likely shaped by the linguistic, cultural, and historical changes.

2019-12-31 | GSE74100 | GEO

Population genetic structure of the Ashkenazi Jewish population

2010-08-16 | GSE23636 | GEO

Reconstructing Prehistoric African Population Structure

Project description:Reconstructing Prehistoric African Population Structure

| PRJEB21878 | ENA

Population genetic structure of the Ashkenazi Jewish population

Project description:The Ashkenazi Jewish population has long been considered a genetic isolate and presumed to have the genetic signatures of founder effects and isolation. We genotyped a large cohort of Ashkenazi Jews and analyzed their genetic structure compared to other worldwide populations. We genotyped 471 normal control Ashkenazi Jewish individuals with the Affymetrix 6.0 array and analyzed their genetic structure relative to other Europe and worldwide populations. We measured heterozygosity, linkage disequilibrium, identity-by-descent and used extended haplotype tests of positive selection.

2010-08-16 | E-GEOD-23636 | biostudies-arrayexpress

Mycobacterium abscessus population structure

Project description:Mycobacterium abscessus population structure of isolates from Cystic Fibrosis patients

| PRJEB39129 | ENA

Affymetrix SNP array data for Genetic Structure of the Newfoundland Population samples

Project description:the data was used to investigate genetic structure of the Newfoundland population.

2016-05-02 | GSE74392 | GEO

Population structure and ancestry of Qinchuan cattle by GeneSeek HD Bovine 77k Genotyping BeadChip

Project description:GeneSeek HD Bovine 77k Genotyping array is used to estimate population structure and ancestry of bovine and evaluate loci responsible for complex traits. Further, copy number variation of bovine can be estimated by GeneSeek HD Bovine 77k Genotyping array. Here, we estimate population structure and ancestry of Qinchuan cattle.

2017-06-15 | GSE100038 | GEO

Population structure of Pyrenophora teres

Project description:Population structure of Pyrenophora teres in France through GBS data

| PRJEB66440 | ENA

Multi-layered population structure in Island Southeast Asians

Project description:The history of human settlement in Southeast Asia has been complex and involved several distinct dispersal events. Here we report the analyses of 1825 individuals from Southeast Asia including new genome-wide genotype data for 146 individuals from three Mainland Southeast Asian (Burmese, Malay and Vietnamese) and four Island Southeast Asian (Dusun, Filipino, Kankanaey and Murut) populations. While confirming the presence of previously recognized major ancestry components in the Southeast Asian population structure, we highlight the Kankanaey Igorots from the highlands of the Philippine Mountain Province as likely the closest living representatives of the source population that may have given rise to the Austronesian expansion. This conclusion rests on independent evidence from various analyses of autosomal data and uniparental markers.

2016-02-04 | GSE77508 | GEO

Gene flow in Neandertals

Project description:Ancient gene flow from modern humans into Siberian Neanderthals

| PRJEB11828 | ENA