Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-Seq of mouse CD4+ T cells to analyse CD4+ TERM cells

ABSTRACT: RNA-Seq of mouse CD4+ T cells to analyse CD4+ TERM cells

PROVIDER: PRJEB51485 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR9130930_1.fastq.gz	Fastqsanger.gz
	ERR9130930_2.fastq.gz	Fastqsanger.gz
	ERR9130940_1.fastq.gz	Fastqsanger.gz
	ERR9130940_2.fastq.gz	Fastqsanger.gz
	ERR9130931_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

RNA-Seq of mouse CD4+ T cells to analyse CD4+ TERM cells

Project description:Transcriptional profiles of naive, memory and TERM (early responder memory T cells) CD4+ T cells from control and LCMV memory mice.

2024-05-27 | E-MTAB-11521 | biostudies-arrayexpress

Proteome of primary, CRISPR/CAS9 modified mouse CD4+ T cells

Project description:We analyzed the total proteome of CD4+ T cells isolated from WT mice, and cultured to perform a CRISPR/CAS9 edition of their genome, in order to introduce an OST sequence at the C-terminus of proteins of interest (LAT or UBASH3A, n=6 biological replicates in each case). Control CD4+ T cells , isolated and cultured in the same way, but not modified by CRISPR/CAS9, were also analyzed (CT, n=6 biological replicates), as well as CD4+ T cells which have undergone a smaller number of expansion cycles than long term CD4+ T cells (WT, n=2 biological replicates). Each sample was analyzed once by single run naoLC-MS, resulting in 20 raw files.

2020-09-29 | PXD018766 | Pride

BTLA interacting proteins in mouse CD4+ effector T cells - Part2

Project description:Identifying BTLA interacting proteins in mouse CD4+ effector T cells expressing BTLA at endogenous levels and after stimulation with pervanadate.

2019-05-06 | PXD010863 | Pride

mouse CD4+ T cells IP-MS - Reversing SKI-SMAD4-mediated suppression is essential for TH17 cell differentiation

Project description:Identifying Smad4-binding proteins in mouse CD4+ T cells under IL6SB condition. Mouse CD4+ T cells were isolated from mouse spleen and lymph nodes.

2017-10-26 | PXD007172 | Pride

Synchronized response of CD4+ T cells to short-term dietary changes - CD4+ T cell RNA sequencing

Project description:Synchronized response of CD4+ T cells to short-term dietary changes - CD4+ T cell RNA sequencing

| PRJNA952795 | ENA

Analysis of CD5 interactome in primary mouse CD4+ T cells

Project description:CD4+ T cells were isolated from gene-targeted mouse expressing a One-Strep-tag (OST) at the C terminus of the CD5 protein, briefly expanded in vitro and we analyzed the interactome of their OST-tagged CD5 protein. Affinity purification of the OST tagged protein was performed using Streptactin beads, from T cells either non-stimulated, stimulated 30s, 120s or 300s with anti-CD3 and anti-CD4 antibodies, or 300s with pervanadate. Each AP-MS purification is associated with a corresponding control (purification from CD4+ T cells isolated from WT mice, cultured and stimulated in the same conditions). The number of replicate biological experiments was n=3 for all conditions (time-points), and each sample was analyzed once by single-run nanoLC-MS, resulting in 30 raw files.

2020-09-29 | PXD018552 | Pride

FoxP3 ChIP-seq in mouse CD4+T cells

Project description:FoxP3 ChIP-seq in mouse CD4+T cells

| PRJNA1018988 | ENA

FoxP3 mRNA-seq in mouse CD4+T cells

Project description:FoxP3 mRNA-seq in mouse CD4+T cells

| PRJNA1018989 | ENA

Targets of EOMES in mouse CD4+ T cells

Project description:Targets of EOMES in mouse CD4+ T cells

| PRJNA606190 | ENA

Expression data from purified mouse CD4+ T cells

Project description:Expression data from purified mouse CD4+ T cells