Ontology highlight
ABSTRACT:
PROVIDER: PRJEB51736 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| ERR9356050_1.fastq.gz | Fastqsanger.gz | |||
| ERR9356050_2.fastq.gz | Fastqsanger.gz | |||
| ERR9356060_1.fastq.gz | Fastqsanger.gz | |||
| ERR9356060_2.fastq.gz | Fastqsanger.gz | |||
| ERR9356070_1.fastq.gz | Fastqsanger.gz |
Items per page: 5 1 - 5 of 112 |
Similar Datasets
Project description:Dental calculus is becoming a crucial material in the study of past populations, with increasing interest in its proteomic and genomic content. Here we suggest further development of protocol for analysis of ancient proteins and a combined approach for subsequent ancient DNA extraction. We tested the protocol on recent teeth. We then applied the optimised protocol to ancient teeth to limit the destruction of calculus, as it is a precious and irreplaceable source of dietary, microbiological, and ecological information in the archaeological context. Finally, the applicability of the protocol was proven on samples of ancient calculus.
2023-09-11 | PXD042668 | Pride
Project description:A Minimally Destructive Protocol for DNA Extraction from Ancient Teeth
| PRJEB32750 | ENA
Project description:This dataset includes fastq files from sWGS and exome sequencing data derived from dsDNA and ssDNA libraries of plasma cfDNA samples extracted by a column- or bead-based DNA extraction method
| EGAD00001007019 | EGA
Project description:ancient DNA (aDNA) was extracted from 20 Industrial Age dental calculus using a novel aDNA extraction protocol
| PRJEB75938 | ENA
Project description:This a model from the article:
Critical study of and improvements in chromatographic methods for the analysis
of type B trichothecenes.
Mateo JJ, Llorens A, Mateo R, Jimenez M. J Chromatogr A
2001 May 18;918(1):99-112 11403460
,
Abstract:
Various analytical methods used in the analysis of type B trichothecenes
(deoxynivalenol, nivalenol, 3- and 15-acetyldeoxynivalenol) in cereals were
compared and optimised in this work. These methods use either
GC-electron-capture detection (ECD) of trimethylsilyl, trifluoroacetyl and
heptafluorobutyryl derivatives or HPLC with UV or photodiode array detection of
analytes. A new HPLC procedure using fluorescence detection prior derivatisation
with coumarin-3-carbonyl chloride has been also tested. Five extraction solvents
and two solid-phase extraction cartridges (silica, Florisil) plus a especial
clean-up column (MycoSep 225) were compared in order to obtain the best recovery
of the mycotoxins with minimal presence of coextractives in the chromatograms.
The chosen extraction solvent was a mixture of acetonitrile-water (84:16, v/v).
The MycoSep 225 column was chosen as the best alternative for clean-up of grain
samples. For GC-ECD analysis, derivatisation of analytes with heptafluorobutyric
anhydride prior the final determination was chosen as the most suitable
procedure. HPLC-photodiode array (at 221 nm) analysis was more suitable for
determination of type B trichothecenes than HPLC of the fluorescent
coumarin-3-carbonyl derivatives. Recoveries obtained in spiked corn, rice and
wheat are reported. The utility of the proposed methodology was assayed in
cereal cultures of various Fusarium strains.
This model was taken from the CellML repository
and automatically converted to SBML.
The original model was:
Mateo JJ, Llorens A, Mateo R, Jimenez M. (2001) - version=1.0
The original CellML model was created by:
Catherine Lloyd
c.lloyd@auckland.ac.nz
The University of Auckland
This model originates from BioModels Database: A Database of Annotated Published Models (http://www.ebi.ac.uk/biomodels/). It is copyright (c) 2005-2011 The BioModels.net Team.
To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication
for more information.
In summary, you are entitled to use this encoded model in absolutely any manner you deem suitable, verbatim, or with modification, alone or embedded it in a larger context, redistribute it, commercially or not, in a restricted way or not..
To cite BioModels Database, please use: Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Novère N, Laibe C (2010) BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol., 4:92.
2005-01-01 | MODEL1006230044 | BioModels