Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IdScaSter

ABSTRACT: Scathophaga stercoraria (yellow dung fly), genomic and transcriptomic data

PROVIDER: PRJEB53931 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR9904193_1.fastq.gz	Fastqsanger.gz
	ERR9904193_2.fastq.gz	Fastqsanger.gz
	ERR9904194_1.fastq.gz	Fastqsanger.gz
	ERR9904194_2.fastq.gz	Fastqsanger.gz
	ERR9904195_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 13

Similar Datasets

idScaSter

Project description:Scathophaga stercoraria (yellow dung fly)

| PRJEB53932 | ENA

Scathophaga stercoraria

Project description:Scathophaga stercoraria overview

| PRJNA854226 | ENA

Scathophaga stercoraria

Project description:Scathophaga stercoraria Genome sequencing

| PRJNA1125925 | ENA

idScaInqu

Project description:Scathophaga inquinata, genomic and transcriptomic data

| PRJEB81193 | ENA

idScaFurc

Project description:Scathophaga furcata, genomic and transcriptomic data

| PRJEB79711 | ENA

idLonLute

Project description:Lonchoptera lutea (yellow spear-winged fly), genomic and transcriptomic data

| PRJEB66004 | ENA

Lignocellulose fermentation to ethanol or lactate by giant panda gut microbiomes depends ultimately on pH rather than portion of bamboo

Project description:Giant panda are carnivorous bears which feed almost exclusively on plant biomass (i.e. bamboo). The potential contribution of its gut microbiome to lignocellulose degradation has been mostly investigated with cultivation-independent approaches. Recently, we reported on the first lab-scale cultivation of giant panda gut microbiomes and described their actual fermentation capacity. Fermentation of bamboo leaf using green dung resulted in a neutral pH, the main products being ethanol, lactate and H2. Fermentation of bamboo pith using yellow dung resulted in an acidic pH, the main product being lactate. Here, we cultivated giant panda gut microbiomes to test 1) the impact of mixed dung as inoculum; 2) the fermentation capacity of solid lignocellulose as opposed to organics-rich biofluids in the dung; 3) the artificial shift of pH from neutral to acidic on bamboo leaf fermentation. Our results indicate that i) gut microbiomes fermentation of solid lignocellulose contributes up to a maximum of 1/3 even in the presence of organics-rich biofluids; ii) alcohols are an important product of bamboo leaf fermentation at neutral pH; iii) aside hemicellulose, gut microbiomes may degrade plant cell membranes to produce glycerol; iv) pH, rather than portion of bamboo, ultimately determines fermentation profiles and gut microbiome assemblage.

2021-06-11 | PXD018503 | Pride

idSphMarg

Project description:Sphenella marginata (ragwort fly), genomic and transcriptomic data

| PRJEB59086 | ENA

idNorSpin

Project description:Norellia spinipes (daffodil fly), genomic and transcriptomic data

| PRJEB80043 | ENA

idDilFebr

Project description:Dilophus febrilis (fever fly), genomic and transcriptomic data

| PRJEB59377 | ENA