Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: ChIP-seq for Atlantic Salmon tissues

PROVIDER: PRJEB55063 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR10003200_1.fastq.gz	Fastqsanger.gz
	ERR10003200_2.fastq.gz	Fastqsanger.gz
	ERR10003300_1.fastq.gz	Fastqsanger.gz
	ERR10003300_2.fastq.gz	Fastqsanger.gz
	ERR10003201_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 392

Similar Datasets

Zakhartsev2022 - Constraint-based model of metabolism of Atlantic salmon (Salmo salar)

Project description:SALARECON links the Atlantic salmon genome to metabolic fluxes and growth, focusing on energy, amino acid, and nucleotide metabolism.

2023-01-11 | MODEL2207070001 | BioModels

Responses to Moritella viscosa in skin and spleen of Atlantic salmon

Project description:Bacterial pathogen Moritella viscosa, the causative agent of winter ulcer, causes heavy losses in Atlantic salmon aquaculture. The study compared responses in salmon reared under normal condition (G100) and fish exposed to hypoxia - 60% saturation of dissolved oxygen - at early life (G60). G60 showed lower survival after challenge. Analyses were performed in the most affected tissues: skin and spleen

2021-04-09 | GSE171693 | GEO

Project description:ATACseq for Atlantic Salmon tissues

| PRJEB47408 | ENA

Project description:RNAseq for Atlantic Salmon tissues

| PRJEB47409 | ENA

Project description:ChIPseq for Atlantic Salmon tissues

| PRJEB47410 | ENA

Project description:ChIPseq for Atlantic Salmon tissues

| PRJEB46340 | ENA

De Novo assembly and transcriptome analysis of Atlantic salmon macrophage/dendritic-like TO cells following type I IFN treatment and Salmonid alphavirus subtype-3 infection

Project description:We used RNA-seq to characterize the transcriptomic changes induced by type I IFN treatment and salmon alphavirus subtype 3 (SAV-3) infection in TO-cells, a macrophage/dendritic like cell-line derived from Atlantic salmon (Salmo salar L) head kidney leukocytes.

2014-12-31 | GSE64095 | GEO

Enhanced transcriptomic responses in the Pacific salmon louse Lepeophtheirus salmonis oncorhynchi to the non-native Atlantic Salmon Salmo salar suggests increased parasite fitness

Project description:This study investigates host-specific gene expression of the Pacific salmon lice, Lepeophtheirus salmonis oncorhynchii, while parasitizing a resistant host (Coho salmon), two susceptible hosts (Atlantic salmon, Sockeye salmon), and a population with-held hosts (starved), over 48 hrs.

2017-01-25 | GSE80220 | GEO

Gene expression in Atlantic salmon cell culture in response to infectious salmon anaemia virus (ISAV) and polyinosinic-polycytidylic acid - poly(I:C)

Project description:ISAV is one of the most dangerous pathogens causing high mortality of farmed Atlantic salmon. In this study, transcriptome responses to the virus were examined in vitro in Atlantic salmon head kidney cells culture (ASK). Poly(I:C), synthetic double-stranded RNA stimulating antiviral responses was used as a positive control.

2021-09-03 | GSE183265 | GEO

Project description:microRNA profiling for Atlantic Salmon tissues

| PRJEB59102 | ENA