Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Undefined

ABSTRACT: Chlamydia gallinacea strains

PROVIDER: PRJEB55472 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	220303_5448_unicycler.fasta.gz	Fasta.gz
	220303_5449_unicycler.fasta.gz	Fasta.gz
	220303_5450_unicycler.fasta.gz	Fasta.gz
	220303_5451_chr_list.txt.gz	Txt

Items per page:

1 - 5 of 46

Similar Datasets

Project description:Chlamydia gallinacea strains

| PRJNA687129 | ENA

Chlamydia gallinacea

Project description:Chlamydia gallinacea overview

| PRJNA237483 | ENA

Chlamydia gallinacea 08-1274/3

Project description:Chlamydia gallinacea 08-1274/3 Genome sequencing

| PRJNA209652 | ENA

Chlamydia gallinacea strain:JX-1

Project description:Chlamydia gallinacea strain:JX-1 Genome sequencing

| PRJNA374394 | ENA

Molecular basis of strain variations of a chlamydial pathogen of arthropods

Project description:Variations between strains have been extensively studied in human pathogens mainly because even genomically highly identical strains can cause severely different phenotypes in their hosts. Here we investigate within-species diversity in Rhabdochlamydia porcellionis a pathogen infecting terrestrial isopods and a member of the phylum Chlamydia that also includes well-known human pathogens as Chlamydia trachomatis. Using an infection assay in Sf9 insect cell cultures we could show that albeit there are only few genomic variations, the strains 15C and ZGO cause different phenotypes. To investigate potential underlying mechanisms we carried out a global gene expression analysis and could show that changes in major metabolic pathways help strain 15C to replicate more efficiently in the host cells. In addition we found that genes shown to be involved in pathogenicity and host interaction of human pathogenic chlamydia i.e. genes encoding the type III secretion system and polymorphic membrane proteins are regulated differently by the strains.

2023-09-01 | GSE212062 | GEO

undefined

Project description:Genomics of Ocular Chlamydia trachomatis in Moshi District, Tanzania

| PRJEB46956 | ENA

Transcriptional profiling of human epithelial cells infected with trachoma isolates of Chlamydia trachomatis

Project description:Hep-2C cells were infected with A/2497 or B/Tunis-864 strains of Chlamydia trachomatis to compare changes in host gene expression

2019-12-31 | GSE133358 | GEO

Irediparra gallinacea

Project description:Irediparra gallinacea

| PRJNA959922 | ENA

undefined

Project description:strains from milk

| PRJEB56311 | ENA

Insertional mutagenesis in the zoonotic pathogen Chlamydia caviae

Project description:3 strains of chlamydia caviae have been sequenced to verify their genome. These are WT and two mutants. The mutants have the genes sinC and incA disrupted.

2020-04-03 | E-MTAB-8415 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data