Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

PoolSeq: Aedes aegypti populations from Nepal

ABSTRACT: PoolSeq: Aedes aegypti populations from Nepal

PROVIDER: PRJEB56779 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR10492610_1.fastq.gz	Fastqsanger.gz
	ERR10492610_2.fastq.gz	Fastqsanger.gz
	ERR10492611_1.fastq.gz	Fastqsanger.gz
	ERR10492611_2.fastq.gz	Fastqsanger.gz
	ERR10492612_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Aedes aegypti sex specific gene expression

Project description:This analysis compare gene expression between 4 day old sugar fed female and male Aedes aegypti mosquitoes. Keywords: Aedes aegypti sex specific expression

2007-05-15 | GSE7813 | GEO

Developmental analysis of Aedes aegypti gene expression

Project description:This analysis defines the adult female and developmental specific transcriptomes of Aedes aegypti. Keywords: Aedews aegypti, development, gene expression

2007-05-15 | GSE7811 | GEO

Expression analysis of Meiotic drive system in Aedes aegypti during spermatogenesis

Project description:Investigation of whole genome gene expression level changes of testes in the meiotic drive system in aedes aegypti during spermatogenesis compared to non drive strain. The meiotic drive system in Aedes aegypti causes the female determining chromosome to fragment during spermatogenesis. A six chip study using total RNA from three separately extracted non driving strain testes of Aedes aegypti and three separately extracted meiotic drive strain testes of Aedes aegypti.

2010-07-21 | E-GEOD-23039 | biostudies-arrayexpress

Expression analysis of Meiotic drive system in Aedes aegypti during spermatogenesis

2010-07-21 | GSE23039 | GEO

Deltamethrin resistance mechanisms in Aedes aegypti populations from three French overseas territories worldwide.

Project description:Custom microarrays were used to examine differential gene expression between pyrethroid resistant vs pyrethroid susceptible phenotypes of the dengue vector mosquito Aedes aegypti. Pyrethroid resistant population were from Cayenne (French Guiana, GUY), Baie Mahault (Guadeloupe, GUA) and Noumea (New Caledonia, CAL) whilst New Orleans lab colony represented the lab susceptible strain Pools of total RNA was extracted from the whole bodies of 3 day old female mosquitoes that had survived exposure to 0.06% deltamethrin (for GUY, GUA, CAL) . Single colour hybridization experiments were performed using labelled cDNA on the Agilent 'Aedes aegypti detox chip plus': A-MTAB-574. Four unique biological replicates per population were used in the study

2015-11-08 | E-MTAB-4022 | biostudies-arrayexpress

Aedes aegypti aegypti

Project description:Aedes aegypti aegypti Raw sequence reads

| PRJNA758712 | ENA

Aedes aegypti aegypti

Project description:Aedes aegypti aegypti Raw sequence reads

| PRJNA330553 | ENA

Aedes aegypti aegypti

Project description:Aedes aegypti aegypti Raw sequence reads

| PRJNA600991 | ENA

Aedes aegypti aegypti

Project description:Aedes aegypti aegypti genome-wide variation

| PRJNA273913 | ENA

Aedes aegypti strain:LVP_AGWG (yellow fever mosquito)

Project description:Aedes aegypti mosquitoes infect hundreds of millions of people each year with dangerous viral pathogens including dengue, yellow fever, Zika, and chikungunya. Progress in understanding the biology of this insect, and developing tools to fight it, depends on the availablity of a high-quality genome assembly. Here we use DNA proximity ligaton (Hi-C) and Pacific Biosciences long reads to create AaegL5 - a highly contiguous A. aegypti reference.

2018-08-23 | GSE113256 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data