Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IhPlaCitr

ABSTRACT: Planococcus citri (citrus mealybug)

PROVIDER: PRJEB60012 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	ERR10906111.fastq.gz	Fastqsanger.gz
	ERR10906112.fastq.gz	Fastqsanger.gz
	ERR10908647_1.fastq.gz	Fastqsanger.gz
	ERR10908647_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 23

Similar Datasets

ihPlaCitr1

Project description:Planococcus citri (citrus mealybug) genome assembly, ihPlaCitr1

| PRJEB61558 | ENA

Planococcus citri mealybug virgin and mated female transcriptome sequencing

Project description:P. citri mealybugs cause severe damage in citrus production. We aimed at indentifying genes involved in mealybug sex pheromone biosynthesis. As these should be expressed in virgin females and are presumably downregulated after mating, we looked at genes differentially expressed between mated and virgin females.

2024-02-15 | GSE179660 | GEO

ihPlaCitr

Project description:Planococcus citri (citrus mealybug), genomic and transcriptomic data

| PRJEB60011 | ENA

ihPlaCitr1 alternate haplotype

Project description:Planococcus citri (citrus mealybug) genome assembly, ihPlaCitr1, alternate haplotype

| PRJEB61557 | ENA

Planococcus citri mealybug virgin and mated female transcriptome sequencing

Project description:Planococcus citri mealybug virgin and mated female transcriptome sequencing

| PRJNA744499 | ENA

Molecular and genetic analysis of resistance to METI-I acaricides in Iranian populations of the citrus red mite Panonychus citri

Project description:The citrus red mite, Panonychus citri, is a major pest on citrus all around the world. Mitochondrial Electron Transport Inhibitors of complex I (METI-I) acaricides such as fenpyroximate have been used extensively to control P. citri populations, which resulted in multiple reports of METI-I resistant populations in the field. In this study, gene expression profile differences between METI-I resistant P. citri populations (Lahijan, Ramsar and Sari) and a susceptible P. citri population (Rasht) from Iran were compared using Illumina RNAseq.

2019-12-17 | GSE142139 | GEO

The LOV protein of Xanthomonas citri subsp. citri plays a significant role in the counteraction of plant immune responses during citrus canker

Project description:Transcription profiling of Citrus sinensis leaves following Xanthomonas citri subsp. citri wild type and LOV mutant treatment.<br><br>Samples taken 24 h after treatments were compared.

2013-12-10 | E-MEXP-3975 | biostudies-arrayexpress

Citrus limon: Control vs. Xanthomonas citri T2 inoculation

Project description:Transcriptional Profiling of non-inoculated Citrus limon leaves vs. 48h inoculation with Xanthomonas citri T2

2016-12-18 | GSE78012 | GEO

Citrus limon: Control vs. Xanthomonas citri AT inoculation

Project description:Transcriptional Profiling of non-inoculated Citrus limon leaves vs. 48h inoculation with Xanthomonas citri AT

2016-12-18 | GSE78010 | GEO

Grapevine response to Planococcus ficus feeding

Project description:Plant response to insect feeding appears to be highly specific with regard to the organisms in the system. Here, we report on the interaction between grapevine Vitis vinifera plants and a phloem-feeding insect pest, the vine mealybug Planococcus ficus. Plants were exposed to P. ficus for periods of 6 hours and 96 hours, after which they were analysed for gene expression levels using microarrays and quantitative real-time PCR (qPCR). Both methods showed that grapevine displayed only a minimal response to mealybug feeding at the transcript level at both time periods. Intermediate grapevine exposure times (24, 48 and 72 hours) to P. ficus feeding were investigated using qPCR analysis of ten additional genes associated with known plant defense responses. Results showed that only a single gene, pathogenesis-related protein 1, was differentially expressed after 48 hours of mealybug feeding. During the course of mealybug feeding, however, a number of other genes were significantly up- or down-regulated at certain time points. Thus, it appears as if grapevine responds minimally to feeding by P. ficus as well as within a very narrow time period. The relative lack of grapevine plant defense mechanisms may be a result of the feeding strategies of mealybugs. Eight samples were analysed. Two replicates each were included for each treatment (6 hour and 96 hour feeding), resulting in four samples. Two control replicates were included for each treatment (6 hour and 96 hour feeding controls), resulting in a further four samples.

2012-12-01 | E-GEOD-32343 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data