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QhAmpImpr

ABSTRACT: Amphibalanus improvisus (bay barnacle)

PROVIDER: PRJEB63653 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	ERR11641150_1.fastq.gz	Fastqsanger.gz
	ERR11641150_2.fastq.gz	Fastqsanger.gz
	ERR11641078.fastq.gz	Fastqsanger.gz
	ERR11641079.fastq.gz	Fastqsanger.gz

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qhAmpImpr

Project description:Amphibalanus improvisus (bay barnacle), genomic and transcriptomic data

| PRJEB63652 | ENA

Amphibalanus improvisus

Project description:Amphibalanus improvisus overview

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Balanus trigonus

Project description:Amphibalanus improvisus Genome sequencing and assembly

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The genome of the barnacle Balanus improvisus provides high-resolution insights to its extraordinary genetic diversity

Project description:Genome of the barnacle Balanus improvisus

| PRJEB75260 | ENA

The mode of action of antifouling compound albofungin in inhibiting barnacle settlement

Project description:In the present study, proteomic analyses were used to investigate changes in the transcriptome and proteome of a major fouling barnacle Amphibalanus amphitrite cyprids in response to albofungin treatment.

2023-02-21 | PXD039255 | Pride

Comparison of Amphibalanus amphitrite exuviae (molts) and adhesive

Project description:The base of the barnacle Amphibalanus amphitrite has a layer of protein and cuticle that adheres the barnacle to the surface. The proteins in the adhesive have been characterized, but it is unknown whether the adhesive proteins are associated with the cuticle. To address this possibility, we examined the proteins associated with the molt (exuviae) from the main body, which is also composed of cuticle.

2021-09-08 | PXD013036 | Pride

Project description:Transcriptomics of barnacle Balanus improvisus settlement stages

| PRJNA528777 | ENA

qhAmpImpr1.Spiroplasma_sp_1

Project description:Spiroplasma endosymbiont of Amphibalanus improvisus genome assembly, qhAmpImpr1.Spiroplasma_sp_1

| PRJEB75075 | ENA

Identification of recombinant settlement-inducing protein complex from Amphibalanus amphitrite by LC-MS/MS

Project description:Settlement-inducing protein complex (SIPC) is a protein that acts as a phoromone cue to attract conspecific of the barnacle Amphibalanus amphitrite to settle on a substrate. Recombinant settlement-inducing protein complex was expressed in insect Sf9 cells through a baculovirus overexpression system, purified and analysed by mass spectrometry to confirm its identity.

2019-01-07 | PXD006858 | Pride

Comparative analysis of stalked and acorn barnacle adhesive proteomesv

Project description:Barnacles interest the scientific community for multiple reasons: their unique evolutionary trajectory, vast diversity, and economic impact as a harvested food source and also as one of the most prolific macroscopic hard biofouling organisms. A common, yet novel, trait among barnacles is adhesion, which has enabled a sessile adult existence and global colonization of the oceans. Barnacle adhesive is primarily composed of proteins, but knowledge of how the adhesive proteome varies across the tree of life is unknown due to a lack of genomic information. Here, we supplement previous mass spectrometry analyses of barnacle adhesive with recently sequenced genomes to compare the adhesive proteomes of Pollicipes pollicipes (Pedunculata) and Amphibalanus amphitrite (Sessilia). Although both species contain the same broad protein categories, we detail differences that exist between these species. The barnacle-unique cement proteins show the greatest difference between species, although these differences are diminished when amino acid composition and glycosylation potential are considered. By performing an in-depth comparison of the adhesive proteomes of these distantly related barnacle species, we show their similarities and provide a roadmap for future studies examining sequence specific differences to identify the proteins responsible for functional differences across the barnacle tree of life.

2022-02-17 | PXD026105 | Pride

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