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K562+mESC HIVE

ABSTRACT: Single cell sequencing with HIVE and HIVE CLX of K562 and mESC cells

PROVIDER: PRJEB67548 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	ERR12167385_1.fastq.gz	Fastqsanger.gz
	ERR12167385_2.fastq.gz	Fastqsanger.gz
	ERR12167386_1.fastq.gz	Fastqsanger.gz
	ERR12167386_2.fastq.gz	Fastqsanger.gz
	ERR12167387_1.fastq.gz	Fastqsanger.gz

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RAMPAGE dataset for the human K562 cell line

Project description:5'-complete cDNA sequencing on ribosome-depleted total RNA from the human K562 cell line. Provides high-quality, genome-wide single-base resolution profiling of transcription start sites and their expression levels. This dataset represents a whole-genome, single-base resolution profiling of transcription start site (TSS) expression in the human K562 cell line. These profiles were established using RAMPAGE, a high-throughput, high-accuracy 5'-complete cDNA sequencing method implemented on the Illumina platform. The data was analyzed using custom scripts and algorithms that are all available upon request.

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