Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Diversity Links to Functionality: Unraveling the Impact of Pressure disruption and Culture medium on crude oil-enriched microbial communities from the deep Eastern Mediterranean Sea

ABSTRACT: Hydrocarbon-degrading microbial consortia from the deep Eastern Mediterranean Sea

PROVIDER: PRJEB67953 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR12186822_1.fastq.gz	Fastqsanger.gz
	ERR12186822_2.fastq.gz	Fastqsanger.gz
	ERR12186823_1.fastq.gz	Fastqsanger.gz
	ERR12186823_2.fastq.gz	Fastqsanger.gz
	ERR12186824_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

CRUDE OIL CONTAMINATED SITES

Project description:A metagenomic study to analyze the biodiversity of hydrocarbon degrading organisms and the corresponding genes

| PRJEB7399 | ENA

Hydrocarbon-degrading microbial consortia from surface and deep waters of the Eastern Mediterranean Sea

Project description:Characterization and Biotechnological Potential of Hydrocarbon-Degrading Consortia from Surface and Deep Waters of the Eastern Mediterranean Sea.

| PRJEB43541 | ENA

Rapid Response of Eastern Mediterranean Deep Sea Microbial Communities to Oil.

Project description:Deep marine oil spills like the Deepwater Horizon (DWH) in the Gulf of Mexico have the potential to drastically impact marine systems. Crude oil contamination in marine systems remains a concern, especially for countries around the Mediterranean Sea with off shore oil production. The goal of this study was to investigate the response of indigenous microbial communities to crude oil in the deep Eastern Mediterranean Sea (E. Med.) water column and to minimize potential bias associated with storage and shifts in microbial community structure from sample storage. 16S rRNA amplicon sequencing was combined with GeoChip metagenomic analysis to monitor the microbial community changes to the crude oil and dispersant in on-ship microcosms set up immediately after water collection. After 3 days of incubation at 14 °C, the microbial communities from two different water depths: 824 m and 1210 m became dominated by well-known oil degrading bacteria. The archaeal population and the overall microbial community diversity drastically decreased. Similarly, GeoChip metagenomic analysis revealed a tremendous enrichment of genes related to oil biodegradation, which was consistent with the results from the DWH oil spill. These results highlight a rapid microbial adaption to oil contamination in the deep E. Med., and indicate strong oil biodegradation potential.

| S-EPMC5515914 | biostudies-literature

crude oil metagenome

Project description:oil pipeline community Genome sequencing

| PRJNA356928 | ENA

crude oil metagenome

Project description:Oil reservoir metagnome

| PRJNA290886 | ENA

crude oil metagenome

Project description:Crude oil Metagenome

| PRJNA263752 | ENA

crude oil metagenome

Project description:Crude oil tank sludge Metagenome

| PRJNA263753 | ENA

crude oil metagenome

Project description:Crude oil contaminated soil Metagenome

| PRJNA263754 | ENA

crude oil metagenome

Project description:Investigation of bacteria in crude oil after surviving in different sterilization methods and stimulated by different exogenous bacteria

| PRJDB3386 | ENA

crude oil metagenome

Project description:Tarball Metagenome

| PRJNA297864 | ENA