Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Marine sediment microbiomes

ABSTRACT: Bacterial communities in ARAON Mounds of Chukchi Sea

PROVIDER: PRJEB70287 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR12305900_1.fastq.gz	Fastqsanger.gz
	ERR12305900_2.fastq.gz	Fastqsanger.gz
	ERR12305901_1.fastq.gz	Fastqsanger.gz
	ERR12305901_2.fastq.gz	Fastqsanger.gz
	ERR12305902_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 228

Similar Datasets

Marine sediment microbiomes

Project description:Archaeal communities in ARAON Mounds of Chukchi Sea

| PRJEB70286 | ENA

Marine sediment microbiomes

Project description:Marine sediment microbiomes in ARAON Mounds of Chukchi Sea

| PRJEB70288 | ENA

marine sediment metagenome

Project description:Fungal diversity associated with deep-sea asphalt seep mounds

| PRJDB4410 | ENA

Marine sediment microbiomes

Project description:Marine sediment microbiomes in East Siberian Sea

| PRJEB76672 | ENA

Bering Strait surface water and Chukchi Sea bottom water microbiome metaproteomics

Project description:Analysis of bacterial fraction collected on GF/F filters post pre-filtration on 1um filter. 15L were filtered from Bering Strait (BSt) surface water and Chukchi Sea (station 2) bottom waters.

2019-01-25 | PXD006472 | Pride

Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes

Project description:Microbial communities respond to temperature with physiological adaptation and compositional turnover. Whether thermal selection of enzymes explains marine microbiome plasticity in response to temperature remains unresolved. By quantifying the thermal behaviour of seven functionally-independent enzyme classes (esterase, extradiol dioxygenase, phosphatase, beta-galactosidase, nuclease, transaminase, and aldo-keto reductase) in native proteomes of marine sediment microbiomes from the Irish Sea to the southern Red Sea, we record a significant effect of the mean annual temperature (MAT) on enzyme’s response (R2, 0.51–0.80, p < 0.01 in all cases). Activity and stability profiles of 228 esterases and 5 extradiol dioxygenases from sediment and seawater across 70 locations worldwide (latitude 62.2°S–16°N, MAT –1.4ºC–29.5ºC) validate this thermal pattern. Modelling the esterase phase transition temperature as a measure of structural flexibility, confirm the observed relationship with MAT. Furthermore, when considering temperature variability in sites with non-significantly different MATs, the broadest range of enzyme thermal behaviour and the highest growth plasticity of the enriched heterotrophic bacteria occur in samples with the widest annual thermal variability. These results indicate that temperature-driven enzyme selection shapes microbiome thermal plasticity and that thermal variability finely tunes such processes and should be considered alongside MAT in forecasting microbial community thermal response

2023-02-07 | PXD039714 | Pride

marine sediment metagenome

Project description:Characteristics of bacterial communities in the surface sediments from the South Yellow Sea and northern East China Sea

| PRJNA464182 | ENA

marine sediment metagenome

Project description:bacterial coummunity of South China Sea

| PRJDB544 | ENA

marine sediment metagenome

Project description:Characteristics of bacterial, archaeal, and denitrifying microbial communities in the surface sediments from the South Yellow Sea and northern East China Sea

| PRJNA464366 | ENA

marine sediment metagenome

Project description:Coastal Lagoon Sediment Bacterial Communities

| PRJNA376105 | ENA