Project description:Wolf lichen metagenomes and metatranscriptomes
| PRJNA473595 | ENA
Project description:metagenome assembly of PRJEB59037 data set (Lichen metagenomes produced for Tagirdzhanova et al. 2023).
| PRJEB72500 | ENA
Project description:metagenome assembly of PRJNA393325 data set (Metagenomes and metatranscriptomes of Evernia prunastri and Pseudevernia furfuracea).
| PRJEB72391 | ENA
Project description:metagenome assembly of PRJEB38505 data set (Reconstruction of Bacterial Metagenome-Assembled Genome Sequences from Different Lichen Metagenomes).
Project description:The goal of this study was to lay the groundwork for comparative transcriptomics of sex differences in the brain of wolf spiders, a non-model organism of the pyhlum Euarthropoda, by generating transcriptomes and analyzing gene expression. To examine differences in sex-differential gene expression, short read transcript sequencing and de novo transcriptome assembly were performed. Messenger RNA (mRNA) was isolated from dissected brain tissue of male and female subadult and mature wolf spiders (Schizocosa ocreata). The data consist of short read sequences for the two different life stages in each sex. Computational analyses on these data include de novo transcriptome assembly, using Trinity and CAP3 assembly suites, and differential expression analysis using the edgeR package. Sample-specific and combined transcriptomes, gene annotations, and differential expression results are described in this data note and are available from associated database submissions.
2021-03-12 | GSE168766 | GEO
Project description:metagenome assembly of PRJNA256246 data set (Metagenome from the lichen Dibaeis baeomyces).
| PRJEB72386 | ENA
Project description:metagenome assembly of PRJNA256477 data set (Metagenome of the lichen Physcia stellaris).
| PRJEB72389 | ENA
Project description:metagenome assembly of PRJNA256476 data set (Metagenome of the lichen Leptogium austroamericanum).
| PRJEB72387 | ENA
Project description:metagenome assembly of PRJNA256249 data set (Metagenome of the lichen Peltula cylindrica).