Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ORG.one project - Black rhino (Diceros bicornis)

ABSTRACT: ORG.one project - Black rhino (Diceros bicornis)

PROVIDER: PRJEB74253 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Diceros bicornis

Project description:Diceros bicornis overview

| PRJNA399582 | ENA

Diceros bicornis isolate:BS38

Project description:Diceros bicornis isolate:BS38 Genome sequencing and assembly

| PRJNA399388 | ENA

Diceros bicornis michaeli isolate:Blijdorp_Vungu

Project description:Diceros bicornis michaeli isolate:Blijdorp_Vungu Genome sequencing and assembly

| PRJNA777872 | ENA

Diceros bicornis minor isolate:mBicDic1

Project description:Diceros bicornis minor (Southern black rhinoceros), mDicBic1, maternal haplotype

| PRJNA773944 | ENA

Diceros bicornis minor isolate:mBicDic1

Project description:Diceros bicornis minor (Southern black rhinoceros), mDicBic1, paternal haplotype

| PRJNA773943 | ENA

Extinctions, genetic erosion and conservation options for the black rhinoceros (Diceros bicornis).

Project description:The black rhinoceros is again on the verge of extinction due to unsustainable poaching in its native range. Despite a wide historic distribution, the black rhinoceros was traditionally thought of as depauperate in genetic variation, and with very little known about its evolutionary history. This knowledge gap has hampered conservation efforts because hunting has dramatically reduced the species' once continuous distribution, leaving five surviving gene pools of unknown genetic affinity. Here we examined the range-wide genetic structure of historic and modern populations using the largest and most geographically representative sample of black rhinoceroses ever assembled. Using both mitochondrial and nuclear datasets, we described a staggering loss of 69% of the species' mitochondrial genetic variation, including the most ancestral lineages that are now absent from modern populations. Genetically unique populations in countries such as Nigeria, Cameroon, Chad, Eritrea, Ethiopia, Somalia, Mozambique, Malawi and Angola no longer exist. We found that the historic range of the West African subspecies (D. b. longipes), declared extinct in 2011, extends into southern Kenya, where a handful of individuals survive in the Masai Mara. We also identify conservation units that will help maintain evolutionary potential. Our results suggest a complete re-evaluation of current conservation management paradigms for the black rhinoceros.

| S-EPMC5296875 | biostudies-literature

Babesia bicornis sp. nov. and Theileria bicornis sp. nov.: tick-borne parasites associated with mortality in the black rhinoceros (Diceros bicornis).

Project description:A novel Babesia species, designated Babesia bicornis sp. nov., was identified in three black rhinoceroses (Diceros bicornis) that died in wildlife areas in Tanzania and South Africa. Screening of black rhinoceroses in South Africa revealed, in addition to B. bicornis, a second parasite, designated Theileria bicornis sp. nov.

| S-EPMC154668 | biostudies-literature

ORG.one project

Project description:ORG.one project - Sulcaria isidiifera

| PRJEB48709 | ENA

Osmia bicornis bicornis

Project description:Osmia bicornis bicornis Genome sequencing and assembly

| PRJNA285788 | ENA

GNPS - SD Zoo - Rhino serum - 2020

Project description:Small molecule analysis of Rhino serum extracts from Diceros bicornis, Rhinoceros unicornis, and Ceratotherium simum simum. Standard methanol extraction. Data were acquired using a Bruker Impact Maxis MS and C18 RP-UHPLC. Positive polarity acquisition of LC-MS/MS.

2020-08-25 | MSV000086015 | GNPS

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data