Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

WlLumVari

ABSTRACT: Lumbriculus variegatus (freshwater annelid)

PROVIDER: PRJEB74265 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR12828823_1.fastq.gz	Fastqsanger.gz
	ERR12828823_2.fastq.gz	Fastqsanger.gz
	ERR12804371.fastq.gz	Fastqsanger.gz
	ERR12804372.fastq.gz	Fastqsanger.gz
	ERR12804373.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 9

Similar Datasets

wlLumVari

Project description:Lumbriculus variegatus (freshwater annelid), genomic and transcriptomic data

| PRJEB74264 | ENA

Lumbriculus variegatus

Project description:Lumbriculus variegatus overview

| PRJNA1095096 | ENA

invertebrate gut metagenome

Project description:Gut microbiome of blackworm (Lumbriculus variegatus)

| PRJDB8800 | ENA

Annelid adult cell type diversity and their pluripotent cellular origins

Project description:We used scRNA-seq to profile 75,218 single cell transcriptomes of Pristina leidyi, a highly regenerative and asexually-reproducing freshwater annelid. We characterized all major adult cell types, their transcription factors and gene networks, and uncovered an abundant population of putative stem cells with a pluripotent signature.

2023-04-28 | GSE230505 | GEO

Project description:RNA-seq of regenerating and non-regenerating Lumbriculus variegatus worms

| PRJNA662619 | ENA

Response of Lumbriculus variegatus transcriptome and metabolites to model chemical contaminants

Project description:Transcriptional changes in L. variegatus after worms were exposed to B(a)P, cadmium and pentachlorophenol for 2, 6, 24 and 48 h.

2012-12-11 | E-MEXP-3588 | biostudies-arrayexpress

RNA-seq of developing Cyprinodon variegatus exposed to oil, hypoxia, or both

Project description:The objective of this project was to investigate the impacts of oil exposure in combination with environmental stressors on gene expression in developing C. variegatus.

2019-04-23 | GSE123469 | GEO

RNA seq of larval Cyprinidon variegatus exposed to oil, hypoxia or both for 48 hr, followed by 48 hrs depuration

Project description:The objective of this project was to expose larval Cyprinodon variegatus to oil/hypoxia stressors for 48 hrs, then allow 48 hours of recovery and depuration.

2021-02-19 | GSE167061 | GEO

Project description:Annelid phylogenomics

| PRJNA381155 | ENA

A knockdown gene approach identifies an insect vector membrane protein with Leucin Rich Repeats as one of the receptors for the VmpA adhesin of flavescence dorée phytoplasma

Project description:The adhesion of flavescence dorée phytoplasma to the midgut epithelium cells of their insect vectors is partially mediated by the Variable Membrane Protein A (VmpA), an adhesin which shows lectin properties. In order to identify the insect receptor for VmpA, we lokked for Euscelidius variegatus cells proteins interacting with recombinant VmpA-His6 by mass spectrometry analysis of VmpA-E. variegatus protein complexes formed upon in vitro interaction assays.

2023-11-06 | PXD046447 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data