Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IlLasQuer

ABSTRACT: Lasiocampa quercus (oak eggar), genomic and transcriptomic data

PROVIDER: PRJEB79191 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR13605509.fastq.gz	Fastqsanger.gz
	ERR13602172_1.fastq.gz	Fastqsanger.gz
	ERR13602172_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

ilLasQuer

Project description:Lasiocampa quercus (oak eggar)

| PRJEB79192 | ENA

ilLasQuer1 hap1

Project description:Lasiocampa quercus (oak eggar) genome assembly, ilLasQuer1 haplotype 1

| PRJEB80020 | ENA

ilLasQuer1 hap2

Project description:Lasiocampa quercus (oak eggar) genome assembly, ilLasQuer1 haplotype 2

| PRJEB80021 | ENA

dhQueCerr

Project description:Quercus cerris (Turkey oak), genomic and transcriptomic data

| PRJEB67428 | ENA

dhQueRobu

Project description:Quercus robur (common oak), genomic and transcriptomic data

| PRJEB45102 | ENA

dhQuePetr

Project description:Quercus petraea (sessile oak), genomic and transcriptomic data

| PRJEB74262 | ENA

The impact of drought on phellem development: morpho-physiological adaptations and gene expression dynamics in cork oak stems

Project description:This work aimed to characterize the molecular adaptations occurring in cork oak (Quercus suber) stems in adaptation to drought, and identify key genetic pathways regulating phellem development. One-year-old cork oak plants were grown for additional 6 months under well-watered (WW) or water-deficit (WD) conditions and main stems were targeted for transcriptomic analysis. WD had a negative impact on secondary growth, decreasing the activity of the vascular cambium and phellogen. Following a tissue-specific approach, we analyzed the transcriptional changes imposed by WD in phellem (outer bark), inner bark, and xylem, and found a global downregulation of genes related to cell division, cell wall biogenesis, lignin and/or suberin biosynthesis. Phellem and phloem showed a concerted upregulation of photosynthesis-related genes, suggesting a determinant role of stem photosynthesis in the adaptation of young plants to long-term drought. The data gathered will be important to further harness the diverse genetic background of this species for the development of optimized management practices.

2024-04-29 | E-MTAB-13376 | biostudies-arrayexpress

Lasiocampa quercus

Project description:Lasiocampa quercus overview

| PRJNA1160981 | ENA

ilTriCrat

Project description:Trichiura crataegi (pale eggar), genomic and transcriptomic data

| PRJEB82412 | ENA

dhQueIlex

Project description:Quercus ilex, genomic and transcriptomic data

| PRJEB81052 | ENA