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IlHelHell

ABSTRACT: Helleia helle (violet copper)

PROVIDER: PRJEB79204 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
		Other
	ERR13605515.fastq.gz	Fastqsanger.gz
	ERR13602178_1.fastq.gz	Fastqsanger.gz
	ERR13602178_2.fastq.gz	Fastqsanger.gz

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ilHelHell

Project description:Helleia helle (violet copper), genomic and transcriptomic data

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ilHelHell3 hap1

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ilHelHell

Project description:Lycaena helle (the violet copper butterfly), genomic and transcriptomic data.

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Expression analysis of chicken chorioretinal tissues in control and myopic eyes with or without violet light

Project description:To find the possible molecular mechanism of myopia protection by violet light, we performed expression microarray analysis of chick chorioretinal tissue. The mRNA were obtained at day 13 from the following four groups: control eyes with or without violet light exposure and covered eyes with or without violet light exposure, and then the gene expression pattern was compared among them. Principle component analysis, which is to find major patterns of variability in gene expression, was performed and we found that the largest gene population (PC1, positive: n = 138, negative: n = 292) was affected by violet light treatment. On the other hand, the second largest gene population (PC2, positive: n = 120, negative: n = 23) was affected in the eyes covered with a plastic lens. The previously reported myopia-related genes such as Bmp2, Ednrb, Fgf2, Igf1, Il18, Irbp, Lumican, Sfrp1, Tgfb1, Vegfa, Vip, and Wnt2b were not found in the PC1 group in vivo, which indicates that they responded less to violet light. In the PC1 group, only one myopia protective gene, EGR1 (ZENK, zif268), was found among the previously reported myopia related genes.

2017-03-08 | GSE90118 | GEO

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Project description:Viola odorata (sweet violet)

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