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XpChiOliv

ABSTRACT: Chiton olivaceus, genomic and transcriptomic data

PROVIDER: PRJEB80160 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	ERR13748505_1.fastq.gz	Fastqsanger.gz
	ERR13748505_2.fastq.gz	Fastqsanger.gz
	ERR13748506.fastq.gz	Fastqsanger.gz

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Project description:In this study, a high-throughput sequencing strategy was employed to identify the mRNA involved in P. olivaceus albinism. Based on P. olivaceus genome, RNA-seq identified 21,787 know genes and 711 new genes by transcripts assembly. Of those, 235 genes exhibited significantly different expression pattern (fold change ≥2 or ≤0.5 and q-value≤0.05), including 194 down-regulated genes and 41 up-regulated genes in albino versus normally pigmented individuals. These genes were enriched to 81 GO terms and 9 KEGG pathways (p≤0.05). Among those, the pigmentation related pathways-Melanogenesis and tyrosine metabolism were contained.

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