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DhCasSati

ABSTRACT: Castanea sativa (European chestnut), genomic and transcriptomic data

PROVIDER: PRJEB81046 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	ERR13800600.fastq.gz	Fastqsanger.gz
	ERR13802735_1.fastq.gz	Fastqsanger.gz
	ERR13802735_2.fastq.gz	Fastqsanger.gz
	ERR13802736_1.fastq.gz	Fastqsanger.gz
	ERR13802736_2.fastq.gz	Fastqsanger.gz

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dhCasSati

Project description:Castanea sativa (European chestnut)

| PRJEB81047 | ENA

Integrated proteomic and metabolomic profiling of Phytophthora cinnamomi attack on sweet chestnut (Castanea sativa) reveals distinct molecular reprogramming proximal to the infection site and away from it

Project description:Phytophthora cinnamomi is one of the most invasive tree pathogens that devastates wild and cultivated forests. Due to its wide host range, knowledge of the infection process at the molecular level is lacking for most of its tree hosts. To expand the repertoire of studied Phytophthora-woody plant interactions and identify molecular mechanisms that can facilitate discovery of novel ways to control its spread and damaging effects, we focused on the interaction between P. cinnamomi and sweet chestnut (Castanea sativa), an economically important tree for the wood processing industry. By using a combination of proteomics, metabolomics, and targeted hormonal analysis, we mapped the effects of P. cinnamomi attack on stem tissues immediately bordering the infection site and away from it. P. cinnamomi led to a massive reprogramming of the chestnut proteome and accumulation of the stress-related hormones salicylic acid (SA) and jasmonic acid (JA) indicating that stem inoculation can be used as an easily accessible model system to identify novel molecular players in P. cinnamomi pathogenicity

2020-11-26 | PXD022381 | Pride

Transcriptome profiles in the catkins of two Castanea mollissima cultivars for dissecting the mechanisms of Shorter Catkins Mutation.

Project description:Chinese Chestnut (Castanea mollissima BL.) has high nutritional and ecological value, so it is widely planted.However, the number of male flowers far exceeds the number of female flowers is an important factor limiting the yield of Chinese chestnut.A naturally occurring mutation in male catkin has been found on a Chinese chestnut tree in the mountains of Beijing, China.This mutant is shorter than the normal catkin.Studies have shown that this mutation can significantly reduce the number of male flowers, promote the differentiation of female flowers, and improve the yield of Chinese chestnut.In this research, we provided the RNA sequencing data of two groups of mutants and normal catkin.The comparative analyses of catkins transcriptomes presented here provides a valuable resource for discovery of genes and networks involved in the regulate the sex of the flower.

2019-09-25 | GSE137937 | GEO

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