Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IlTalTubu

ABSTRACT: Taleporia tubulosa, genomic and transcriptomic data

PROVIDER: PRJEB81655 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR13907251_1.fastq.gz	Fastqsanger.gz
	ERR13907251_2.fastq.gz	Fastqsanger.gz
	ERR13900477.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

ilTalTubu

Project description:Taleporia tubulosa

| PRJEB81656 | ENA

Sarsia tubulosa

Project description:Sarsia tubulosa

| PRJNA1020880 | ENA

Taleporia tubulosa

Project description:Taleporia tubulosa overview

| PRJNA1183535 | ENA

tfGorAlbo

Project description:Gordius_albopunctatus, genomic and transcriptomic data

| PRJEB78907 | ENA

Tropheryma whipplei proteome - Analyses of new genomic, transcriptomic or proteomic data commonly result in trashing many unidentified data escaping the ‘canonical’ DNA-RNA-protein scheme

Project description:Analyses of new genomic, transcriptomic or proteomic data commonly result in trashing many unidentified data escaping the ‘canonical’ DNA-RNA-protein scheme. Testing systematic exchanges of nucleotides over long stretches produces inversed RNA pieces (here named “swinger” RNA) differing from their template DNA. These may explain some trashed data. Here analyses of genomic, transcriptomic and proteomic data of the pathogenic Tropheryma whipplei according to canonical genomic, transcriptomic and translational 'rules' resulted in trashing 58.9% of DNA, 37.7% RNA and about 85% of mass spectra (corresponding to peptides). In the trash, we found numerous DNA/RNA fragments compatible with “swinger” polymerization. Genomic sequences covered by «swinger» DNA and RNA are 3X more frequent than expected by chance and explained 12.4 and 20.8% of the rejected DNA and RNA sequences, respectively. As for peptides, several match with “swinger” RNAs, including some chimera, translated from both regular, and «swinger» transcripts, notably for ribosomal RNAs. Congruence of DNA, RNA and peptides resulting from the same swinging process suggest that systematic nucleotide exchanges increase coding potential, and may add to evolutionary diversification of bacterial populations.

2017-12-18 | PXD006238 | Pride

Targeted inhibition of TAK1 phosphorylation at Thr184,184 sites by Tubuloside B to improve rheumatoid arthritis synovium function

Project description:Rheumatoid arthritis (RA) is an intractable chronic inflammatory disease characterized by synovial hyperplasia and consecutive inflammation. Tubuloside B (Tub B) is the major active constituent isolated from Cistanche tubulosa (Schenk) Wight which is a traditional Chinese medicine with anti-inflammatory efficacy. In this study, we aimed to examine the ability of Tubuloside B to treat RA and explore the underlying mechanisms.

2021-12-18 | GSE191101 | GEO

qcCryHort

Project description:Cryptops hortensis, genomic and transcriptomic data

| PRJEB77756 | ENA

neEchMats

Project description:Echinomermella matsi, genomic and transcriptomic data

| PRJEB77774 | ENA

wdMesRoge

Project description:Mesochaetopterus rogeri, genomic and transcriptomic data.

| PRJEB77795 | ENA

qqOdiTrog

Project description:Odiellus troguloides, genomic and transcriptomic data.