Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil microbial community in peanut field

ABSTRACT: Effects of peanut varieties inoculated with rhizobia agent on soil and microbial community

PROVIDER: PRJEB84001 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR14106215.fastq.gz	Fastqsanger.gz
	ERR14106216.fastq.gz	Fastqsanger.gz
	ERR14106217.fastq.gz	Fastqsanger.gz
	ERR14106218.fastq.gz	Fastqsanger.gz
	ERR14106219.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Four peanut varieties soil bacterial community

Project description:Effects of four peanut varieties inoculated with rhizobia agent on soil and microbial community

| PRJEB83962 | ENA

peanut rhizosphere microbial community

Project description:peanut rhizosphere microbial community Genome sequencing

| PRJNA592826 | ENA

peanut rhizosphere microbial community

Project description:peanut rhizosphere microbial community Genome sequencing

| PRJNA575117 | ENA

peanut spermosphere microbial community

Project description:peanut spermosphere microbial community Raw sequence reads

| PRJNA580321 | ENA

peanut field

Project description:peanut field Raw sequence reads

| PRJNA1057715 | ENA

CC027/GeniUnc mouse strain-derived jejunal epithelial cells before and after peanut sensitization and at 30, 60, and 120 minutes after peanut challenge

Project description:Peanut allergy reaction severity correlates with increased intestinal epithelial cell (IEC) barrier permeability. CC027/GeniUnc mice develop peanut allergy by intragastric administration of peanut proteins without adjuvant. We report that peanut-allergic CC027/GeniUnc mice showed increased IEC barrier permeability and systemic peanut allergen Ara h 2 after challenge. Jejunal epithelial cell transcriptomics showed effects of peanut allergy on IEC proliferation, survival, and metabolism, and revealed IEC-predominant angiopoietin like-4 (Angptl4) as a unique feature of CC027/GeniUnc peanut allergy. Peanut-allergic pediatric patients demonstrated significantly higher serum ANGPTL4 compared to non-peanut-allergic but atopic patients, highlighting its potential as a biomarker of peanut allergy.

2021-07-09 | GSE179595 | GEO

peanut rhizosphere bacterial community

Project description:peanut rhizosphere bacterial community

| PRJNA636625 | ENA

Comparison of gene expression profiles in cultivated peanut (Arachis hypogaea L.) under strong artificial selection

Project description:Comparison of gene expression profiles of widespread peanut cultivars for exploring the expression data in pod and leaf with regard to signatures of artificial selection We investigated the overall expression by hybridizing the microarray (GPL13178) with RNA samples from pods and leaves of five selected representative peanut varieties (Fuhuasheng, Shitouqi, Yueyou116, Shanyou523, and Yueyou7), which were widely cultivated in different periods of the past fifty years in southern China. We used the RNA sample from Yueyou7 pod as a reference for all the pod hybridizations, and used the Yueyou7 leaf sample as a reference for all the leaf hybridizations. Field grown plants under normal irrigation were used for sample collection. Replicates with dye-swap were performed for each genotype.

2012-06-18 | E-GEOD-30128 | biostudies-arrayexpress

peanut rhizosphere bacterial community

Project description:peanut rhizosphere bacterial community Raw sequence reads

| PRJNA636587 | ENA

Single cell RNA sequencing of peanut-responsive T cells

Project description:Peanut-responsive T cells from peanut allergic subjects were identified and selected based on CD154 expression after stimulation of peripheral blood mononuclear cells with crude peanut extract for 18h. As controls, polyclonally activated CD4+ T cells from peanut allergic subjects were selected. Additional controls included CD4+CD25+CD127- Tregs from peanut allergic or healthy controls. Single cells were obtained using the C1 system from Fluidigm, and a barcoded library constructed. Sequencing (Illumina) was performed using 100 nt paired end reads. Data on a total of 431 cells was available. The goal of the study was to understand the heterogeneity of the peanut-specific T cell response.

2017-12-01 | GSE98852 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data