Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

IPPAS cyanobacterial genomes sequencing

ABSTRACT: Cyanobacterial genomes of the IPPAS microalgae collection

PROVIDER: PRJEB86070 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

A high resolution map of a cyanobacterial transcriptome

Project description:Previous molecular and mechanistic studies have identified several principles of prokaryotic transcription, but less is known about the global transcriptional architecture of bacterial genomes. Here we perform a comprehensive study of a cyanobacterial transcriptome, that of Synechococcus elongatus PCC 7942, generated by combining three high-resolution data sets: RNA sequencing, tiling expression microarrays, and RNA polymerase chromatin immunoprecipitation (ChIP) sequencing. We report absolute transcript levels, operon identification, and high-resolution mapping of 5' and 3' ends of transcripts. We identify several interesting features at promoters, within transcripts and in terminators relating to transcription initiation, elongation, and termination. Furthermore, we identify many putative non-coding transcripts. We provide a global analysis of a cyanobacterial transcriptome. Our results uncover insights that reinforce and extend the current views of bacterial transcription. RNA Sequencing of the cyanobacterium Synechococcus elongatus PCC 7942 RNA polymerase ChIP Sequencing of the cyanobacterium Synechococcus elongatus PCC 7942 Tiling Microarray of the cyanobacterium Synechococcus elongatus PCC 7942

2011-05-16 | E-GEOD-29264 | biostudies-arrayexpress

A high resolution map of a cyanobacterial transcriptome

2011-05-16 | GSE29264 | GEO

Synechocystis sp. IPPAS B-1465

Project description:Synechocystis sp. IPPAS B-1465 Genome sequencing

| PRJNA438225 | ENA

Cyanobacterial

Project description:Metatranscriptome of cyanobacterial aggregates

| PRJNA359157 | ENA

Gloeocapsopsis sp. IPPAS B-1203

Project description:Gloeocapsopsis sp. IPPAS B-1203 Genome sequencing and assembly

| PRJNA415142 | ENA