Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bog plants core microbiome

ABSTRACT: Analysing core microbiome of the Alpine bog vegetation

PROVIDER: PRJEB8670 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	ERR775697.fastq.gz	Fastqsanger.gz
	ERR775698.fastq.gz	Fastqsanger.gz
	ERR775699.fastq.gz	Fastqsanger.gz
	ERR775700.fastq.gz	Fastqsanger.gz
	ERR775701.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

Microbiome Core Asthma Blood Samples

Project description:MAP Project 25 asthma blood samples run for the UCSD Microbiome Core

2022-09-01 | MSV000090246 | MassIVE

Equine Core Microbiome

Project description:The Core Equine Faecal Microbiome: A Broader Perspective

| PRJEB31377 | ENA

Functional genome and microbiome in blood of goats affected by the gastrointestinal pathogen Haemonchus contortus

Project description:The Alpine goat Capra aegagrus hircus is parasitized by the barber pole worm (Haemonchus contortus). This relationship results in changes that affect the gene expression of the host, the pest, and the microbiome of both. Hematological parameters indicating genes that are expressed and/or the % Composition of abundant and diverse microbial flora are reflective of infestation. We identified responses to barber pole worms using blood-based analysis of transcripts and the microbiome. Seven (7) days post-inoculation (dpi) we identified 7,627 genes associated with different treatment types.

2021-03-26 | GSE169607 | GEO

GNPS Microbiome Core Asthma Blood Samples

Project description:MAP Project 25 asthma blood samples run for the UCSD Microbiome Core

| MSV000090246 | GNPS

NIH Human Microbiome Project - Core Microbiome Sampling Protocol A (HMP-A)

Project description:<p>This first clinical study of the Human Microbiome Project (HMP) addresses whether individuals share a core human microbiome. It involves broad determination of the microbiota found in five anatomical sites: the oral cavity, skin, nasal cavity, gastrointestinal tract and vagina. This study will enroll approximately 300 healthy male and female adults, 18-40 years old, from two geographic regions of the US: Houston, TX and St. Louis, MO. The participation of healthy individuals will create a baseline for discovery of the core microbiota typically found in various areas of the human body. The information from this initial study can then be used to help assess the changes in the complement of microbiota found on or within diseased individuals.</p>

| phs000228.v3.p1 | EGA

Black Soldier Fly core microbiome

Project description:The core gut microbiome of Black Soldier Fly (Hermetia illucens) larvae

| PRJEB33904 | ENA

The microbiome of the lichen Lobaria pulmonaria varies according to climate in Europe

Project description:The Lobaria pulmonaria holobiont consists of algal, fungal, cyanobacterial, and integrated diverse bacterial components and thrives in undisturbed, humid forests. We set out to investigate the role of the microbiome of L. pulmonaria in the adaptation of this ecologically sensitive lichen species to diverse climatic conditions. Our central hypothesis posited that microbiome composition and functionality aligns with continental-scale climatic parameters related to temperature and precipitation. In addition, we tested whether short-term weather dynamics, sampling season, and the genotypes of the fungal and algal partners influenced the variation in the lichen microbiome. Insights into compositional and functional changes within the microbiome were obtained using metaproteomics. Comparative examinations between Sub-Atlantic Lowland (SAL) and Alpine (ALP) regions unveiled the distinct impact of climate on microbiome functions.

2024-07-03 | PXD049079 | Pride

bog metagenome

Project description:bog metagenome Genome sequencing and assembly

| PRJNA610704 | ENA