Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Total mRNA sequencing of Kellet's whelk embryos

PROVIDER: PRJNA1000198 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25457800_1.fastq.gz	Fastqsanger.gz
	SRR25457800_2.fastq.gz	Fastqsanger.gz
	SRR25457801_1.fastq.gz	Fastqsanger.gz
	SRR25457801_2.fastq.gz	Fastqsanger.gz
	SRR25457802_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 140

Similar Datasets

Project description:total mRNA sequencing

| PRJNA563166 | ENA

Understanding microRNA regulation involved in metamorphosis of the veined rapa whelk (Rapana venosa)

Project description:The veined rapa whelk (Rapana venosa) is widely consumed in China but is also a predator that is reducing bivalves resources in oceans worldwide. Larval metamorphosis of this species, a pelagic to benthic transition that involves considerable structural and physiological changes, plays a pivotal role in its commercial breeding and natural populations. Thus, the endogenous microRNA that drive this transition attract considerable interest. This study is the first to investigate alterations of miRNA expression during metamorphosis in a marine gastropod by using high-throughput sequencing. A total of 195 differentially expressed miRNAs were obtained, including 65 miRNAs differentially expressed during the transition from pre-competent larva to competent larva (33 up-regulated and 32 down regulated) and 123 miRNAs differentially expressed during competent to post larva transition (96 up-regulated and 27 down regulated). Our data improve understanding of the microRNA function into R. venosa metamorphosis and provide a solid basis for further study.

2017-09-01 | GSE102631 | GEO

Project description:Wheat spikelet total mRNA sequencing.

| PRJNA877088 | ENA

Project description:Genome sequencing of Kellet's whelk

| PRJNA999368 | ENA

Project description:miRNA-mRNA sequencing of zebrafish embryos

| PRJNA889683 | ENA

Early developmental transcriptome of Musca domestica.

Project description:Using mRNA next generation sequencing, we analyze the transcriptome of Musca domestica embryos through five stages of early development: from syncytial blastoderm to dorsal closure stage. We select 100 embryos for five developmental stages: syncytial blastoderm, cellular blastoderm, gastrula, germ band extension and dorsal closure. A total of 10 samples of mRNA were obtained, represent two biological replicates for each stage.

2016-08-04 | E-GEOD-85160 | biostudies-arrayexpress

Project description:New Zealand Penion whelk ddRAD sequencing

| PRJNA564825 | ENA

Identification of the molecular basis of anti-cancer effect of Huaier.

Project description:Intervention type:DRUG. Intervention1:Huaier, Dose form:GRANULES, Route of administration:ORAL, intended dose regimen:20 to 60/day by either bulk or split for 3 months to extended term if necessary. Control intervention1:None. Primary outcome(s): For mRNA libraries, focus on mRNA studies. Data analysis includes sequencing data processing and basic sequencing data quality control, prediction of new transcripts, differential expression analysis of genes. Gene Ontology (GO) and the KEGG pathway database are used for annotation and enrichment analysis of up-regulated genes and down-regulated genes. For small RNA libraries, data analysis includes sequencing data process and sequencing data process QC, small RNA distribution across the genome, rRNA, tRNA, alignment with snRNA and snoRNA, construction of known miRNA expression pattern, prediction New miRNA and Study of their secondary structure Based on the expression pattern of miRNA, we perform not only GO / KEGG annotation and enrichment, but also different expression analysis.. Timepoint:RNA sequencing of 240 blood samples of 80 cases and its analysis, scheduled from June 30, 2022..

| 2612481 | ecrin-mdr-crc

C. elegans: total mRNA vs. AWA-specifc mRNA

Project description:C. elegans: total mRNA vs. AWA-specifc mRNA

| PRJNA448452 | ENA

ddRADseq Buccinum undatum

Project description:ddRAD sequencing of Common Whelk, Buccinum undatum

| PRJEB37370 | ENA