Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Mus musculus

ABSTRACT: Dicer conditional knockout embryonic heart mutant vs control array

OTHER RELATED OMICS DATASETS IN: E-GEOD-7333

PROVIDER: PRJNA100449 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Dicer conditional knockout embryonic heart mutant vs control array

Project description:The goal is to find out the gene expression changes when Dicer was inactivated in the murine heart. Keywords: Dicer mutant Dicer gene was specifically inactivated in the mouse heart using cardiac specific Nkx2.5 Cre knock-in line. Embryonic day 11.5 heart from mutant and control hearts were compared in triplicates.

2010-06-11 | E-GEOD-7343 | biostudies-arrayexpress

Small RNA and transcriptome profiling of mice deficient in either germline Dgcr8 or Dicer

Project description:We used Illumina Small RNA and RNA-Seq kits to prepare both small RNA and RNA-Seq libraries from total RNA isolated from either leptotenze/zygotene or pachytene spermatocytes purified from either Dgcr8 or Dicer germline conditional knockout mice. Conditional knockout mice were generated by using a Ddx4 promoter to drive cre excision of either Dgcr8 or Dicer at embryonic day 18. Mixed leptotene/zygotene or pachytene spermatocytes were then isolated from the testis of adult conditional knockout mice, along with paired WT littermates as a control. RNA was isolated from these spermatocytes using Trizol. Small RNA or RNA-Seq libraries were then prepped using Illumina's sequencing library preparation kits.

2015-05-06 | E-GEOD-63166 | biostudies-arrayexpress

Expression profiling of dendritic cell (DC) progenitors from Gata2 conditional knockout mice

Project description:Transcriptional profiling of mouse comparing in vitro-derived DC progenitors from control and Gata2 conditional knockout mice. Two-condition experiment, Control DCs vs. G2 Knockout DCs. Biological replicates: 4 control, 3 Gata2 knockout, independently grown and harvested. One replicate per array.

2016-05-31 | GSE82044 | GEO

Mus musculus

Project description:Anterior Heart Field (AHF)-conditional Mef2c Knockout

| PRJNA281945 | ENA

Mus musculus

Project description:Mouse embryo heart, e10.5 AVC: Control vs. Tbx3 hypomorphic mutant

| PRJNA130061 | ENA

Differential miRNA expression caused by Dicer knockout in small intestine

Project description:Dicer knockout cause lipid metabolism dysregulation in small intestine. Analyses of transcriptomics and proteomics reveal key enzymes affected by Dicer knockout. Conditional knockout of Dicer in adult mice

2012-01-07 | E-GEOD-34909 | biostudies-arrayexpress

Differential gene expression caused by Dicer knockout in small intestine

2012-01-07 | E-GEOD-34905 | biostudies-arrayexpress

Mus musculus

Project description:Wildtype vs. CENPF knockout heart comparison

| PRJNA152349 | ENA

Mus musculus

Project description:Control vs. AngII Infusion: Heart

| PRJNA89995 | ENA

Extensive crosstalk between lncRNAs and mRNAs in mouse stem cells

Project description:To determine the temporal variation of mRNA levels, we collected and sequenced poly-adenylated RNA from all cell extracts, cytoplasmic and nuclear fractions of a conditional Dicer mutant [DTCM23/49 XY (Nesterova et al. 2008)] mouse Embryonic Stem Cells before induction of Dicer excision (day 0) and at days 4, 8, 10 and 12 following Dicer loss of function. coverage.

2015-01-31 | GSE58757 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data