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Expression patterns of total stomach cells in 6-month H. felis-infected versus uninfected mice.

ABSTRACT: Expression patterns of total stomach cells in 6-month H. felis-infected versus uninfected mice.

PROVIDER: PRJNA1004648 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR25619102_1.fastq.gz	Fastqsanger.gz
	SRR25619102_2.fastq.gz	Fastqsanger.gz
	SRR25619103_1.fastq.gz	Fastqsanger.gz
	SRR25619103_2.fastq.gz	Fastqsanger.gz
	SRR25619104_1.fastq.gz	Fastqsanger.gz

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Expression patterns of total stomach cells in 6-month H. felis-infected versus uninfected mice.

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Project description:Gli1 is necessary for the progression from chronic gastric inflammation to metaplasia in the stomach. We therefore compared the expression patterns between 6-month H. felis infected WT and Gli1-/- stomachs. Pooled tissue from the gastric fundi of 3 mice per group. Groups are WT, WT + H. felis (6 months), Gli1-/-, and Gli1-/- +H. felis (6 months). All the infected and control mice were obtained from the same experiment.

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Project description:A vagotomy of the anterior region of the stomach of INS-GAS mice was performed at 6 month of age. The mice were sacrificed at 8, 10 and 12 months of age, The gene expression of the anterior and posterior regions of the stomach was compared at each time point.

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Project description:RNA-seq on embryonic 14.5 day mouse stomach For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

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