Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Jennings Woods Vernal Pond and Upland Sequences-Fungi

PROVIDER: PRJNA1006366 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR25664300_1.fastq.gz	Fastqsanger.gz
	SRR25664300_2.fastq.gz	Fastqsanger.gz
	SRR25664301_1.fastq.gz	Fastqsanger.gz
	SRR25664301_2.fastq.gz	Fastqsanger.gz
	SRR25664302_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Project description:Jennings Woods Vernal Pond and Upland Sequences-Bacteria

| PRJNA1006353 | ENA

red upland soil fungi

Project description:red upland soil fungi Raw sequence reads

| PRJNA826680 | ENA

Project description:sequences of fungi

| PRJNA844554 | ENA

An European eel-specific microarray platform was developed to identify genes involved in response to pollutants

Project description:An European eel-specific microarray platform was developed to identify genes involved in response to pollutants. A comparative analysis of gene expression was conducted between European eel Anguilla anguilla individuals from lowly-polluted Wijmeers pond at Uitbergen (Belgium), highly-polluted Hazewinkel pond at Willebroek (Belgium), extremely-polluted Dessel-Schotel canal at the locations of Schotel (Belgium) and low polluted Bolsena lake (Italy) environments.

2013-05-22 | GSE41240 | GEO

Two upland cotton tree fiber samples from different seasons

Project description:Two fiber tissues harvested 10 days post anthesis from upland cotton trees grown under the same green house conditions except for different seasons of the year were used for RNA extraction. Small RNA molecules under 30 bases were amplified and isolated from an agarose gel. The purified DNA was used directly for cluster generation and sequencing analysis using the Illumina Genome Analyzer according to the manufacturer's instructions. The 35nt sequence tags from sequencing went through data cleaning first, which included getting rid of the low-quality tags and several kinds of contaminants from the 35nt tags. All clean tag sequences with copy numbers were then summarized into a fasta format file.

2011-07-01 | GSE27697 | GEO

De novo assembly of siRNA immunity in wild plants

Project description:We describe an application of deep sequencing and de novo assembly of short RNA reads to investigate small interfering (si)RNAs mediated immunity in leaf samples from eight tree taxa naturally occurring in Wytham Woods, Oxfordshire, UK. BLAST search for homologues of contigs in the GenBank identified siRNA populations against a number of RNA viruses and a Ty1-copia retrotransposons in these tree species.

2012-06-01 | GSE22079 | GEO

root associated fungus metagenome

Project description:Arbuscular Mycorrhizal Fungi Associated with Upland Rice in Bangladesh

| PRJDB10831 | ENA

Comparison of cotton fiber to ovule at 9 DPA

Project description:RNAs from the upland cotton 9-DPA fibers were compared to the 9-DPA fiber-detached ovule. RNAs from the upland cotton 9-DPA fibers were compared to the 9-DPA fiber-detached ovule.

2010-07-01 | E-GEOD-4642 | biostudies-arrayexpress

Project description:fungi for ITS rDNA sequences

| PRJNA828139 | ENA

Project description:Fungi for ITS rDNA sequences

| PRJNA811366 | ENA